BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0298.p
         (386 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979927|ref|YP_001355051.1| enoyl(3-hydroxyisobutyryl)-coen...   189   3e-49
gi|152980360|ref|YP_001351930.1| enoyl-CoA hydratase [Janthinoba...    68   9e-13

>gi|152979927|ref|YP_001355051.1|
           enoyl(3-hydroxyisobutyryl)-coenzyme A hydratase protein
           [Janthinobacterium sp. Marseille]
          Length = 374

 Score =  189 bits (479), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/372 (36%), Positives = 193/372 (51%), Gaps = 38/372 (10%)

Query: 25  TLASEKTLHAISLEMVQLLTPQLQRWQADPGVAMVILQAQGEKAFCAGGDLQQLYRSMRE 84
           TL   + ++++SL MV+ L  +L  WQ DP V  V++ +   KAFCAGGD+       R 
Sbjct: 28  TLNRPEAMNSLSLPMVRTLAEKLGAWQHDPAVRAVLIDSSLPKAFCAGGDI-------RF 80

Query: 85  HHASPERDDIRANTYAAEFFEQEYRLDYLIHSFAKPILCWGHGIVMGGGIGLM---AGCS 141
            H   +      +    +FF +EY L++LIH + KP +    GIVMGGG+G+    A  S
Sbjct: 81  FHEVAQGGLTGGSALLEDFFTEEYALNHLIHHYPKPYIALMDGIVMGGGMGIAQSSAAAS 140

Query: 142 HRVVTEKSRLAMPEITIGLYPDVGGSWFLARMPGKTGIFLALTGANLNASDALFAGLADY 201
            RVVTE++R+AMPE+ IGL+PDVGG +FL+R+PG+ G +L L+G  + A+DAL+A LAD 
Sbjct: 141 IRVVTERTRMAMPEVNIGLFPDVGGGYFLSRLPGELGTYLGLSGEIVGAADALYANLADV 200

Query: 202 RVAHAGKQAVINALLVQSWGAGNDAELLDRVLAVAQASSLQDGTAAFAASNLRSHFDLIE 261
            V  +   A++N                  +LA  +    +    +FAA   +S  D   
Sbjct: 201 FVPRSELPALMN------------------LLASIKDDRYRQAIESFAAP-FKSQIDPAN 241

Query: 262 S-LCRRPTL------PEIVEGILA--LQTDDAWLNKAQATLRAGAPGSAWLGYALQKRVR 312
           S L R+ TL       + VE I+A     DD +  K    L   +P    +     +R  
Sbjct: 242 SLLARQRTLIDRHFEHDEVEAIVASLASDDDPFAQKTLEILHKRSPLMIHVSLEQIRRSA 301

Query: 313 PLSLAEVFRLEFVVSLHCAARPDFVEGIRALIIDKDQKPQWNPASLTSATAQWVEGFFTD 372
            L LA+  RLE  +   C    + VEGIRAL+IDKD  PQW PA+L     + +  FF  
Sbjct: 302 KLELADCLRLERTMVRRCFEHGETVEGIRALVIDKDNTPQWRPATLKEVMPEMIAPFFES 361

Query: 373 PWSREHHPLADL 384
            W    HPL +L
Sbjct: 362 AWPGYAHPLREL 373


>gi|152980360|ref|YP_001351930.1| enoyl-CoA hydratase
           [Janthinobacterium sp. Marseille]
          Length = 258

 Score = 67.8 bits (164), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 18/193 (9%)

Query: 13  LTAINGRRIGIATLASEKTLHAISLEMVQLLTPQLQRWQADPGVAMVILQAQGEKAFCAG 72
           L  I+G+ +G+ TL     L+A++ +++  L   LQ +  D  +  +I+    EKAF AG
Sbjct: 7   LVEIHGK-VGVITLNRPAALNALNDKLMDELGLALQSFDGDDDIGCMIITGS-EKAFAAG 64

Query: 73  GDLQQLYRSMREHHASPERDDIRANTYAAEFFEQEYRLDYLIHSFAKPILCWGHGIVMGG 132
            D+  +        A+    D+    Y    +EQ       I S  KP++    G  +GG
Sbjct: 65  ADIGAM--------ATYTYMDVYKGDYITRNWEQ-------IRSVRKPVIAAVAGYALGG 109

Query: 133 GIGLMAGCSHRVVTEKSRLAMPEITIGLYPDVGGSWFLARMPGKT-GIFLALTGANLNAS 191
           G  L   C   +  + ++   PEI +G+ P  GG+  L R   K+  + L LT   ++A+
Sbjct: 110 GCELAMMCDFIIAADTAKFGQPEIKLGIIPGAGGTQRLPRAVSKSKAMDLCLTARMMDAA 169

Query: 192 DALFAGLADYRVA 204
           +A  AGL    VA
Sbjct: 170 EAERAGLVSRVVA 182


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.135    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 898,126
Number of extensions: 35119
Number of successful extensions: 139
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 135
Number of HSP's successfully gapped: 3
Length of query: 386
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 301
Effective length of database: 906,776
Effective search space: 272939576
Effective search space used: 272939576
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)