BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0279.p (1333 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152982749|ref|YP_001351700.1| haemagglutinin-like protein [Ja... 218 3e-57 gi|152982456|ref|YP_001353396.1| hemagglutinin-related protein [... 201 2e-52 gi|152982752|ref|YP_001352451.1| haemagglutinin-like protein [Ja... 160 6e-40 gi|152982590|ref|YP_001353306.1| large exoproteins involved in h... 139 1e-33 gi|152982189|ref|YP_001353305.1| heme utilization/adhesion prote... 127 6e-30 >gi|152982749|ref|YP_001351700.1| haemagglutinin-like protein [Janthinobacterium sp. Marseille] Length = 671 Score = 218 bits (554), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 179/516 (34%), Positives = 249/516 (48%), Gaps = 103/516 (19%) Query: 68 AAAVCGAWQAPVLAAAPAPGAL------PTGWSVVNGNVSFNQNGNTLNINQLSPQAIAR 121 A A+ A+ PVLAA + P+ +VVNG V+F+QNGN I SP AI Sbjct: 12 AWAIRCAFLPPVLAACLGATGISSAIANPSNPTVVNGQVTFSQNGNVYTITN-SPSAIIN 70 Query: 122 FASFSIGSDAAVNVAQPSSTAALLAKVSGSDISQIYGKLSANGTVVLYNPNGVVIGPSGT 181 + SFSI + V Q +S++++L +++G D SQI G L +NG V L NPNG++ G Sbjct: 71 WNSFSINAGELVRFIQQNSSSSVLNRITGQDPSQIMGALESNGRVFLINPNGIMFGAGAQ 130 Query: 182 VDAGRFIATSLAISDSDFLAGKLNFAKDGSAGLVDNQGKINSATGGSVYLIGGSVSNSGI 241 ++ +A++LAISDS+FLAGK F AG V+N G I + +GG VYLI V+NSGI Sbjct: 131 INVAGLVASTLAISDSNFLAGKNKFTAGDVAGAVNNMGAITTPSGGQVYLIAPDVTNSGI 190 Query: 242 IASPQGEVILAAGQTVTLADTATPGVTVNVTGSAGNVTNLGTITAEAGRIGVAAGLITNS 301 I SP+GEV+LAAG++V LAD++ P + V V+ NLG + A+ GRIG+ A LI Sbjct: 191 ITSPKGEVVLAAGRSVQLADSSNPDMHVVVSAPTDRALNLGDVIAQGGRIGIYAALINQR 250 Query: 302 GVINA-SSVVREGGRIFLRAAGNLTTTA--------------------------NSSISA 334 G +NA S+V+ E G+I L+A+G A N+ + Sbjct: 251 GKLNANSAVLGENGKIILKASGTTLLEAGSKTTATGAGTGGEVQVLGEKVGLMGNALVDV 310 Query: 335 DGTTGGNVTL------------------YAQNKAFIDGDVSATG---------------- 360 G TGG L + A I D A+G Sbjct: 311 SGQTGGGTALIGGDYQGENAKVQNAEQTFVGKDAVIKADAIASGNGGKVIVWANQTAQAY 370 Query: 361 ---------APGKGGFVETSGLQQLDVVKV------PKVGSGGTWLIDPSDLEVVPSGTL 405 A G GGF+ETSGL LDV + PK G G WL+DP ++ V Sbjct: 371 GSIFARGGAAWGNGGFIETSGLDHLDVAGIRIDAGAPK-GKNGQWLLDPKNIIV------ 423 Query: 406 AGSQDGDGAYAVTSSLGGSQISASTINSQLNNGTSVTLTTGSVGLQDGN-ITVSADISKT 464 DG + ++ + I++QL ++ T V LQ N IT + T Sbjct: 424 ---NDGPAPLSDAAAFSNRPGETTEISAQL-----LSNATADVILQATNDITFQYGVGNT 475 Query: 465 TGGNSTLTLQAGNNISINANIISTSGQLNVNLKSGY 500 G S LT QAGNNI ++A + T N+ L + Y Sbjct: 476 HEGVS-LTAQAGNNIYVDAMLSFTK---NITLAANY 507 >gi|152982456|ref|YP_001353396.1| hemagglutinin-related protein [Janthinobacterium sp. Marseille] Length = 2112 Score = 201 bits (511), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 132/302 (43%), Positives = 183/302 (60%), Gaps = 10/302 (3%) Query: 68 AAAVCGAWQAPVLAAA-PAPG-----ALPTGWSVVNGNVSFNQNGNTLNINQLSPQAIAR 121 A A+ A+ PVLAA A G A P+ +VVNG V+F+QNGN I SP AI Sbjct: 12 AWAIRCAFLPPVLAACLGATGISSAIATPSNPTVVNGQVTFSQNGNVYTITN-SPSAIIN 70 Query: 122 FASFSIGSDAAVNVAQPSSTAALLAKVSGSDISQIYGKLSANGTVVLYNPNGVVIGPSGT 181 + SFSI + V Q +S++++L +++G D SQI G L +NG V L NPNG++ G Sbjct: 71 WNSFSINAGELVRFIQQNSSSSVLNRITGQDPSQIMGALESNGRVFLINPNGIMFGAGAQ 130 Query: 182 VDAGRFIATSLAISDSDFLAGKLNFAKDGSAGLVDNQGKINSATGGSVYLIGGSVSNSGI 241 ++ +A++LAISDS+FLAGK F AG V+N G I + +GG VYLI V+NSGI Sbjct: 131 INVAGLVASTLAISDSNFLAGKNKFTAGDVAGAVNNMGAITTPSGGQVYLIAPDVTNSGI 190 Query: 242 IASPQGEVILAAGQTVTLADTATPGVTVNVTGSAGNVTNLGTITAEAGRIGVAAGLITNS 301 I SP+GEV+LAAG++V LAD++ P + V V+ + NLG + A+ GRIG+ A LI Sbjct: 191 ITSPKGEVVLAAGRSVQLADSSNPDMHVVVSAPSDRALNLGDVIAQGGRIGIYAALINQR 250 Query: 302 GVINA-SSVVREGGRIFLRAAGNLTTTANSSISADGT-TGGNVTLYAQNKAFI-DGDVSA 358 G +NA S+V+ E G+I L+A+ + A S SA G GG V + Q A D + A Sbjct: 251 GKLNANSAVLGENGKIVLKASRDTLLEAGSVTSATGVGQGGEVQVLGQRVALTGDARIDA 310 Query: 359 TG 360 +G Sbjct: 311 SG 312 >gi|152982752|ref|YP_001352451.1| haemagglutinin-like protein [Janthinobacterium sp. Marseille] Length = 1272 Score = 160 bits (404), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 167/467 (35%), Positives = 235/467 (50%), Gaps = 83/467 (17%) Query: 48 RLLRRSWLRVLAPCLRISVAAAAVCGAWQAPVLAAAPAPGALPTGWSVVNGNVSFNQNGN 107 R RRS R LA L + AA VC AAP G + G +GN+S Q+GN Sbjct: 28 RNKRRS-ARRLAVLLSGLLPAALVC---------AAPVGGEVSAG----SGNIS--QSGN 71 Query: 108 TLNINQLSPQAIARFASFSIGSDAAVNVAQPSSTAALLAKVSGSDISQIYGKLSANGTVV 167 T I Q S + + SF+IG++ +V QP + A L +V G D S+I G LSANG V Sbjct: 72 TTTIQQNSDRLAINWNSFNIGANESVRFNQPGAHAIALNRVLGQDPSKILGNLSANGQVF 131 Query: 168 LYNPNGVVIGPSGTVDAGRFIATSLAISDSDFL--AGKLNFAKDGSAGL-VDNQGKINSA 224 + NPNGV+ G V+ G +AT++ +SDSDF+ GK F G AG V NQG+I +A Sbjct: 132 ILNPNGVLFGNGAQVNVGGLVATTMKLSDSDFMNGNGKYVFTPGGVAGASVVNQGEI-AA 190 Query: 225 TGGSVYLIGGSVSNSGIIASPQGEVILAAGQTVTLADTATPGVTVNVTGSAGN--VTNLG 282 GG + L+ V N G + + G V LAAG +TL A +T+++ A + N Sbjct: 191 NGGYIALLAPKVINEGKLIADGGNVTLAAGTEMTLTLAAHSLLTLSIDQGAVDALAANHH 250 Query: 283 TITAEAGRI--------GVAAGLITNSGVINASSVVREGGRIFLRAAGNLTTTANSSISA 334 I A+ G + V +G++ N+GVI A +V + G I L A G ++ Sbjct: 251 LIQADGGVVLLSSKGQDAVLSGVVNNTGVIQARTVSNQNGEIRLMAYG-------GTVLV 303 Query: 335 DGTTGGNVTLYAQNKAFIDGDVSATGAPGKGGFVETSG--LQQLDVVKVPKV---GSGGT 389 DGT D SAT A G GGF++TSG ++ D V+V G G Sbjct: 304 DGTL----------------DASAT-AGGNGGFIDTSGGKVKIADSVQVTTAAARGKTGM 346 Query: 390 WLIDPSDLEVVPSGTLAGSQDGD-GAYAVTSSLGGSQISASTINSQLNNGTSVTLTTGSV 448 WLIDP+D + SG GD A +++S LGG+ I+ T+ T G Sbjct: 347 WLIDPNDFIIANSG-------GDIAATSLSSLLGGTNITFKTV------------TDGHA 387 Query: 449 GLQDGNITVSADISKTTGGNSTLTLQAGNNISINANIISTSGQLNVN 495 G +G+I V+ +S +G +TLTL+A NI++NA I + G L +N Sbjct: 388 G--NGDIFVNDAVSWNSG--NTLTLEAERNINLNAAINAGQGGLTLN 430 >gi|152982590|ref|YP_001353306.1| large exoproteins involved in heme utilization or adhesion [Janthinobacterium sp. Marseille] Length = 1738 Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 155/491 (31%), Positives = 238/491 (48%), Gaps = 78/491 (15%) Query: 106 GNTLNINQLSPQAIARFASFSIGSDAAVNVAQPSSTAALLAKVSGSDISQIYGKLSANGT 165 G T I Q S + S ++ A+ QP+S+A L +++GS S + G L+ANG Sbjct: 72 GKTTTIKQNSQNLAIDWVGLSTAANEALIFNQPNSSAIALNRITGSSPSTLLGSLTANGQ 131 Query: 166 VVLYNPNGVVIGPSGTVDAGRFIATSLAISDSDFLAGKLNFAKDGSA-GLVDNQGKINSA 224 V + NPNGV+ G V+ G +A++L +S++D AG++ FA DG+ G V NQGKIN+A Sbjct: 132 VFILNPNGVLFGAGSQVNVGGLVASTLGMSNADLQAGRMVFALDGNTNGSVVNQGKINAA 191 Query: 225 TGGSVYLIGGSVSNSGIIASPQGEVILAAGQTVTLADTATPGVTVNVTGSAGN--VTNLG 282 GG V LI G+V N G I + G +LAAG VTL + ++ A N N Sbjct: 192 DGGYVALIAGTVRNEGEINAKLGTALLAAGNKVTLNINNGSLLAYSIDQGALNALAENKQ 251 Query: 283 TITAEAGRIGVAA--------GLITNSGVINASSVVREGGRIFLRAAGNLTTTANSSISA 334 I A G++ ++A ++ N+G+I A ++ GRI L Sbjct: 252 LIQANGGQVLMSAKALNTLTTAVVNNTGLIEAKTIENRNGRIMLM--------------- 296 Query: 335 DGTTGGNVTLYAQNKAFIDGDVSATGAP--GKGGFVETSGLQQLDVVKVPKV------GS 386 G++ + N A G + A+ AP G GGFVETS ++V +V G Sbjct: 297 -----GDMEVGTVNVA---GTLDAS-APTSGDGGFVETSA-ASVNVASGTRVITRAASGL 346 Query: 387 GGTWLIDPSDLEVVPSGTLAGSQDGDGAYAVTSSLGGSQISASTINSQLNNGTSVTLTTG 446 GG WLIDP+D + AGS + GS I A T++S L +G ++T+ T Sbjct: 347 GGNWLIDPTDFTIT-----AGSGTNN----------GSSIGADTLSSNLADG-NITIATS 390 Query: 447 SVGLQDGNITVSADISKTTGGNSTLTLQAGNNISINANIIS--TSGQLNVNLKSGY---S 501 + G +G+I V++ +S +S LTL A NI+ N + + T+ L +N Y + Sbjct: 391 AAGTGNGDIFVNSAVSWAA--DSVLTLTAHRNINFNTALTASGTNAGLELNYGGDYIVKA 448 Query: 502 PLSMSLLSFVESESPSHFSTVGNGARVVLNGGSLTVNDGSNSGDLLISNGTVDLGSGTLN 561 P+++ S S S GN ++ + L DG+N+ SN + + + Sbjct: 449 PITL-------SGSNSTLKINGNSYTLIRSMAQLDALDGTNA----TSNSGIRVSTDGYY 497 Query: 562 ARAVQLNSAGV 572 A A LN+AG+ Sbjct: 498 ALAQDLNAAGI 508 >gi|152982189|ref|YP_001353305.1| heme utilization/adhesion protein [Janthinobacterium sp. Marseille] Length = 1605 Score = 127 bits (318), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 135/423 (31%), Positives = 201/423 (47%), Gaps = 66/423 (15%) Query: 77 APVLAAAPAPGALPTGWSVVNGNVSFNQNGNTLNINQLSPQAIARFASFSIGSDAAVNVA 136 AP + AA A A +V G+ S + GNT I Q S + S ++ A+ Sbjct: 53 APTVHAANAADA-----TVTLGSGSVSTVGNTTTIKQNSQNLAIDWVGLSTAANEALIFN 107 Query: 137 QPSSTAALLAKVSGSDISQIYGKLSANGTVVLYNPNGVVIGPSGTVDAGRFIATSLAISD 196 QP+S+A L +++GS S + G L+ANG V + NPNGV+ G V+ G +A++L +S+ Sbjct: 108 QPNSSAIALNRITGSSPSTLLGSLTANGQVFILNPNGVLFGAGSQVNVGGLVASTLGMSN 167 Query: 197 SDFLAGKLNFAKDGSA-GLVDNQGKINSATGGSVYLIGGSVSNSGIIASPQGEVILAAGQ 255 +D AG++ FA DG+ G V NQGKIN+A GG + LI +V N G I + G +LAAG Sbjct: 168 ADLQAGRMVFALDGNTNGSVVNQGKINAADGGYIALIAATVRNEGEINAKLGTALLAAGN 227 Query: 256 TVTLADTATPGVTVNVTGSAGN--VTNLGTITAEAGRIGVAA--------GLITNSGVIN 305 VTL + ++ A N N I A G++ ++A ++ N+G+I Sbjct: 228 KVTLNINNGSLLAYSIDQGALNALAENKQLIQANGGQVLMSAKALNTLTTAVVNNTGLIE 287 Query: 306 ASSVVREGGRIFLRAAGNLTTTANSSISADGTTGGNVTLYAQNKAFIDGDVSATGAPGKG 365 A ++ GRI L G++ +++ GT D SA G G Sbjct: 288 AKTIENRNGRIMLM--GDMEV---GTVNVAGTL----------------DASAP-TSGNG 325 Query: 366 GFVETSGLQQL---DVVKVPKVGSG--GTWLIDPSDLEVVPSGTLAGSQDGDGAYAVTSS 420 GF+ETS D + + SG G+WLIDP D V SG GD Sbjct: 326 GFIETSAAHVKIADDALITTRANSGTSGSWLIDPVDFTVAASG-------GD-------- 370 Query: 421 LGGSQISASTINSQL-NNGTSVTLTTGSVGLQDGNITVSADISKTTGGNSTLTLQAGNNI 479 I+ +++QL NNG + T G+I V+ +S ++ NS L L A +I Sbjct: 371 -----ITGKALSTQLANNGLVTIMNTQGASGTAGDINVNDTVSWSS--NSVLELIAQRDI 423 Query: 480 SIN 482 + N Sbjct: 424 NFN 426 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.307 0.125 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 2,709,576 Number of extensions: 116042 Number of successful extensions: 1007 Number of sequences better than 1.0e-08: 17 Number of HSP's gapped: 657 Number of HSP's successfully gapped: 52 Length of query: 1333 Length of database: 1,221,021 Length adjustment: 95 Effective length of query: 1238 Effective length of database: 869,806 Effective search space: 1076819828 Effective search space used: 1076819828 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 135 (56.6 bits)