BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0276.p (280 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981140|ref|YP_001355236.1| aldo/keto reductase family oxid... 343 8e-96 gi|152981244|ref|YP_001351942.1| hypothetical protein mma_0252 [... 109 2e-25 gi|152981199|ref|YP_001351939.1| hypothetical protein mma_0249 [... 108 5e-25 gi|152982773|ref|YP_001352426.1| aldo/keto reductase family oxid... 77 1e-15 >gi|152981140|ref|YP_001355236.1| aldo/keto reductase family oxidoreductase [Janthinobacterium sp. Marseille] Length = 277 Score = 343 bits (879), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 170/272 (62%), Positives = 205/272 (75%) Query: 9 LRNGAQVPTLGQGTWNMGESGAAAATEVRALQAGIDLGMTLIDTAEMYADGNAERIVGQA 68 L +G VP LGQGTW MG+ A E+ +L+ G+DLGMTLIDTAEMY DG +E++VG+A Sbjct: 6 LPSGLAVPVLGQGTWYMGDEAHRRADEIASLRLGLDLGMTLIDTAEMYGDGASEKLVGEA 65 Query: 69 IAGRRQQVYLVSKVLPHNASQRGTIAACEASLKRLGTDHIELYLLHWRGPHPLAATVEGM 128 IAGRR +V+LVSKVLP NAS+ GTIAACE SL+RLGTD I+LYLLHWRG P A T+ Sbjct: 66 IAGRRDEVFLVSKVLPSNASRSGTIAACERSLRRLGTDCIDLYLLHWRGRTPFAETIAAF 125 Query: 129 EKLVAQGKIGGWGVSNLDSDDIDELLQEPQGSHYLCNQVLYNLSRRGIEYDLLPQALEQG 188 E L GKI WGVSN+D DD+ E+ + P G NQVLYNL+RRGIE+DLLPQA +G Sbjct: 126 EALQDAGKIRHWGVSNMDVDDMREIARAPGGDAMATNQVLYNLTRRGIEFDLLPQAQARG 185 Query: 189 VAIMAYSPIEQGRILKNATLGTVAQRHGVTPAQVALAWVLRRPGVIAIPKAADTAHVQAN 248 + +MAYSPIEQGR+ + + +A RHGVTPAQVALAWVLR+ GVIAIPKA+ HV+ N Sbjct: 186 LPLMAYSPIEQGRLTEYPEVLDIADRHGVTPAQVALAWVLRQEGVIAIPKASTPEHVREN 245 Query: 249 RACLDLQLTAADLKELDAAFPPPRRKQPLAML 280 RA LDLQLTA DL+ELD FPPP + L M+ Sbjct: 246 RAALDLQLTAEDLEELDDMFPPPDGPESLEMI 277 >gi|152981244|ref|YP_001351942.1| hypothetical protein mma_0252 [Janthinobacterium sp. Marseille] Length = 337 Score = 109 bits (273), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 95/315 (30%), Positives = 146/315 (46%), Gaps = 51/315 (16%) Query: 10 RNGAQVPTLGQGTWNMGESGAAAATEVRALQAGIDLGMTLIDTAEMYADGNAERIVGQAI 69 ++G +V L GT G + T + +Q + G+ IDTA++Y G +ER+VG+ I Sbjct: 8 KSGLKVSRLCLGTMMFG-GASDEQTSHQIIQHAHEHGINFIDTADIYTGGESERVVGKGI 66 Query: 70 AGRRQQVYLVSKV------LPHNA--SQRGTIAACEASLKRLGTDHIELYLLHWRGP-HP 120 A +R + L +KV P+ S+R I A E SL+RLGTD+I++Y LH P P Sbjct: 67 AAQRDKWVLATKVGNGSDKWPNEKGLSRRRIIQAVEQSLQRLGTDYIDIYYLHRPDPATP 126 Query: 121 LAATVEGMEKLVAQGKIGGWGVSNLDSDDIDELL---QEPQGSHYLCNQVLYNLSRRGIE 177 L TV + L+AQGKI +G+SN + + E++ +E + + +Q YN + R E Sbjct: 127 LHETVRALGDLIAQGKIRYFGLSNFSAWQLAEVVHLSKELGVAPPIVSQPYYNAANRMPE 186 Query: 178 YDLLPQALEQGVAIMAYSPIEQGRIL----------KNATLG------------------ 209 + LP G+ +++YSP+ +G + +N+ +G Sbjct: 187 VEHLPACHFHGLGVVSYSPLARGVLTGKYLPGNEPDQNSRVGRGDKRALQTEWRPESIAL 246 Query: 210 -----TVAQRHGVTPAQVALAWVLRR---PGVIAIPKAADTAHVQANRACLDLQLTAADL 261 AQ HG T ++ALAWVL VI P+ + QA L+ T D Sbjct: 247 AQALQEHAQVHGTTNIELALAWVLNNRLVTSVIGGPRTFE--QWQAYLNGLNYHFTPEDE 304 Query: 262 KELDAAFPPPRRKQP 276 D PP P Sbjct: 305 ALFDRLVPPGHPSTP 319 >gi|152981199|ref|YP_001351939.1| hypothetical protein mma_0249 [Janthinobacterium sp. Marseille] Length = 337 Score = 108 bits (269), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 94/311 (30%), Positives = 143/311 (45%), Gaps = 53/311 (17%) Query: 10 RNGAQVPTLGQGTWNMGESGAAAATEVRALQAGIDLGMTLIDTAEMYADGNAERIVGQAI 69 R G ++ L G G T VR + ID G+ +IDTA +YA G +E G+A+ Sbjct: 11 RTGVKISPLTLGCMMFGNKTELDDT-VRIIDRAIDAGINIIDTANVYARGRSEEFTGEAL 69 Query: 70 A--GRRQQVYLVSKV-LP--------HNASQRGTIAACEASLKRLGTDHIELYLLHWRGP 118 G+R+ ++L SKV LP +S+R I E SL+RL TD+++LY +H P Sbjct: 70 KRNGKRKDIFLASKVHLPMHDTDGNLRGSSRRHIIQQVEDSLRRLQTDYLDLYQIH--RP 127 Query: 119 HPLAA---TVEGMEKLVAQGKIGGWGVSNLDSDDIDELL---QEPQGSHYLCNQVLYNLS 172 P A T+ ++ LV GK+ G + + E L +E + ++ Q YNL Sbjct: 128 EPTTAIDETLRALDDLVKSGKVRYIGSTTFAGWQVVEALWASKELGLNRFVSEQPPYNLL 187 Query: 173 RRGIEYDLLPQALEQGVAIMAYSPIEQG---------------------------RILKN 205 R IE +LLP A G+A++ +SPI G R + Sbjct: 188 DRRIERELLPVAETFGLAVIPWSPIGGGLLSGKYRKGQPLPLDSRYTNPNPMQARRFVDR 247 Query: 206 AT-----LGTVAQRHGVTPAQVALAWVLRRPGVI-AIPKAADTAHVQANRACLDLQLTAA 259 L +A GV +Q+ALAWV ++ GV AI ++ ++++LT Sbjct: 248 VFDVIEPLSELAAEKGVPLSQLALAWVAQQRGVTSAITGPRTLEQLEDALQAIEVKLTPE 307 Query: 260 DLKELDAAFPP 270 DL+ +DA PP Sbjct: 308 DLQRIDAIIPP 318 >gi|152982773|ref|YP_001352426.1| aldo/keto reductase family oxidoreductase TAS [Janthinobacterium sp. Marseille] Length = 349 Score = 77.0 bits (188), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 91/337 (27%), Positives = 141/337 (41%), Gaps = 80/337 (23%) Query: 14 QVPTLGQGTWNMGESGAAAATEVRALQAGIDLGMTLIDTAEMY-------ADGNAERIVG 66 +V + GT GE A + L I G+ LID AEMY G ER +G Sbjct: 12 KVSNIALGTMTWGEQNTEAEAHAQ-LDMAIAAGVNLIDAAEMYPVPPKPETQGLTERYLG 70 Query: 67 QAI--AGRRQQVYLVSKV-----LPH---------NASQRGTIA-ACEASLKRLGTDHIE 109 + +G+R Q+ + +K LPH + R ++ A +L+RL TD+I+ Sbjct: 71 TWLKKSGKRDQLIIATKAAGPARLPHQPQHVRHGKTSFDRASLTDALHGNLERLQTDYID 130 Query: 110 LYLLHW------------------RGPHPLAATVEGMEKLVAQGKIGGWGVSNLDSDDID 151 LY LHW P+A T+ + V QGKI GVSN + Sbjct: 131 LYQLHWPDRSVNIFGRQNYTHFPDEDTVPIAETLSVLADFVKQGKIRYIGVSNETPWGLA 190 Query: 152 ELLQEPQG---SHYLCNQVLYNLSRRGIEYDLLPQALEQGVAIMAYSPI----------- 197 + L+ + + Q Y+L R E L + ++ + ++AYSP+ Sbjct: 191 QFLRASEQLNLPRIVSIQNPYSLVNRYFEIALSEFSHQEQIGLLAYSPLAFGVLSGKYLH 250 Query: 198 ----EQGRI-------------LKNATLGTV--AQRHGVTPAQVALAWVLRRPGVIAIPK 238 GRI ++ A V A++HG+ PAQ+ALA+V RP + + Sbjct: 251 GARPADGRITLFERFVRYKAPQVETAVEAYVALARKHGLDPAQMALAYVNTRPFLTSTII 310 Query: 239 AADT-AHVQANRACLDLQLTAADL---KELDAAFPPP 271 A T +Q+N ++L+L A L +E+ P P Sbjct: 311 GATTLGQLQSNLDSINLELDEAVLNGIEEIHNRHPNP 347 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.318 0.134 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 667,977 Number of extensions: 27889 Number of successful extensions: 97 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 90 Number of HSP's successfully gapped: 4 Length of query: 280 Length of database: 1,221,021 Length adjustment: 82 Effective length of query: 198 Effective length of database: 917,867 Effective search space: 181737666 Effective search space used: 181737666 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)