BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0239.p (450 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Jan... 127 1e-30 gi|152980209|ref|YP_001352373.1| acetylornithine transaminase pr... 115 4e-27 gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-o... 97 2e-21 gi|152979840|ref|YP_001354649.1| glutamate-1-semialdehyde 2,1-am... 89 4e-19 gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transami... 80 3e-16 >gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Janthinobacterium sp. Marseille] Length = 413 Score = 127 bits (320), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 116/395 (29%), Positives = 177/395 (44%), Gaps = 44/395 (11%) Query: 47 PLHIVRGEGVWLIDPQGRRYLDVYN--NVTSLGHCHPAVTEAICTQVQTLATNTRYLHET 104 P+ + +G G+WL D G+RY+D+ + + S GH HP + +A+ Q LA +R + Sbjct: 26 PVVLSKGRGIWLWDEDGKRYMDMMSAYSAVSFGHSHPQLVQALTQQAGQLAVTSRAFYTD 85 Query: 105 ILELAERLLATVSETALAHLMLTCTGSEA--------NDLAYRIAKVRTGGVGVIVTDTA 156 L +LL + T + + +G+EA AY++ V +IV Sbjct: 86 QLGRFLQLLCEM--TGMDKALPMNSGTEAVETSLKAARKWAYKVKGVPDQQAQIIVCAGN 143 Query: 157 YHGITDAVSQFSPSLGTTVNLGAHVR-LVPAPRSYHAEGADLGERFTRDVEAAIADLKRH 215 + G + + FS G V P + + A L EAAI Sbjct: 144 FAGRSTTIVGFSSEAQYREGFGPFDGGFVTIP---YGDAAAL--------EAAITP---- 188 Query: 216 GIQPAALIVDSLFTSDGILPGPEGFLKGAVEAIKRAGGLFIADEVQPGFGRTGEHMWGFQ 275 AA +V+ + GI+ P+ +L E R L I DEVQ G GRTG + Sbjct: 189 --HTAAFLVEPIQGEGGIIVPPDAYLAQCREICTRRNILLICDEVQTGLGRTG-RLLACD 245 Query: 276 RHGVIPD-IVTMGKPMGNGQPVAGLLATADVLQEFGQRSRYFNTFGGNTVSCAAALAVLK 334 G+ PD ++ G PV+ LA ++V+ F + +TFGGN ++ A A L Sbjct: 246 HEGIRPDGLILGKALGGGLLPVSAFLARSEVMDVF-TPGDHGSTFGGNPLAAAVGYAALS 304 Query: 335 TIENEALIAHAQQVGSVLLNGLSALAERHAAIGDVRGAGMFVGVELVTDRHTRAPDRSLT 394 + + LIA A+Q G L GL+AL RH AI VRG G+ +G+EL P Sbjct: 305 LLRDGELIAAAEQRGQRLREGLNAL--RHPAIRSVRGKGLLIGLEL-------EPQVITA 355 Query: 395 SEVVNRMRQKGVLLSACAMGHNVLKIRPPLVLTAQ 429 R+ + GVL + H V++ PPL++TA+ Sbjct: 356 RSFCERLMENGVL--SKETHHTVVRFAPPLIITAE 388 >gi|152980209|ref|YP_001352373.1| acetylornithine transaminase protein [Janthinobacterium sp. Marseille] Length = 400 Score = 115 bits (289), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 113/425 (26%), Positives = 193/425 (45%), Gaps = 48/425 (11%) Query: 38 PAYRLMY--EHP-LHIVRGEGVWLIDPQGRRYLDVYNN--VTSLGHCHPAVTEAICTQVQ 92 P L+Y P L G+G+WL D +G+RYLD V LGH + +A+ Q + Sbjct: 7 PVNSLLYITNRPELVFTEGDGMWLTDHKGKRYLDYLQGWAVNCLGHSPQCIQDALNVQAK 66 Query: 93 TLAT-NTRYLHETILELAERLLATVSETALAHLMLTCTGSEANDLAYRIA----KVRTGG 147 L + + +E + LA L + + +G+EAN+ A ++A K+ Sbjct: 67 KLINPSPAFYNEPSIALAALL---TGNSCFDRVFFANSGAEANESAVKLARKWGKLNKNA 123 Query: 148 VG-----VIVTDTAYHGITDAVSQFSPSLGTTVNLGAHVRLVPAPRSYHAEGADLGERFT 202 G +I D ++HG T A S G V P + A D+ Sbjct: 124 AGENRYEIITFDHSFHGRTLATMSASGKAGWDTIYAPQV-----PGFFKATLNDI----- 173 Query: 203 RDVEAAIADLKRHGIQPAALIVDSLFTSDGILPGPEGFLKGAVEAIKRAGGLFIADEVQP 262 V+ I D + A++++ + G++P F++ K G L I DEVQ Sbjct: 174 DSVKKLITD------KTIAVMLEPVQGEGGVIPATREFMQALRALTKEHGVLLIVDEVQT 227 Query: 263 GFGRTGEHMWGFQRHGVIPDIVTMGKPMGNGQPVAGLLATADV-LQEFGQRSRYFNTFGG 321 G GRTGE ++G+Q G+ PDI+T+GK +G G P+A +L ++ E G + T+ G Sbjct: 228 GMGRTGE-LFGYQLSGITPDIMTLGKGIGGGVPLAAMLCREEIACFEPGDQG---GTYNG 283 Query: 322 NTVSCAAALAVLKTIENEALIAHAQQVGSVLLNGLSALAERHAAIGDVRGAGMFVGVELV 381 N + A AV + + + + G+ L L L E+H G+ RG G+ ++L Sbjct: 284 NPLMTAVGNAVAQALLAPGFLQSVKDKGAYLSAALLKLTEKHGLAGE-RGDGLLRALKLG 342 Query: 382 TDRHTRAPDRSLTSEVVNRMRQKGVLLSACAMGHNVLKIRPPLVLTAQQAGLVVQALDES 441 +D + +++ E V G+LL++ ++L+ P L +T ++ +++ L Sbjct: 343 SDIGPQIVEKARDLEPV------GLLLNSPR--PDLLRFMPALNVTYEELDQMIEMLSGV 394 Query: 442 LNEAR 446 L+E + Sbjct: 395 LSELK 399 >gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-oxononanoate transaminase [Janthinobacterium sp. Marseille] Length = 450 Score = 97.1 bits (240), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 96/360 (26%), Positives = 164/360 (45%), Gaps = 34/360 (9%) Query: 50 IVRGEGVWLIDPQGRRYLDVYNN--VTSLGHCHPAVTEAICTQVQTL--ATNTRYLHETI 105 + G G WL D G+RYLD ++ V GH +P + A+ +Q+ L A + HE + Sbjct: 39 VSHGRGAWLYDTDGQRYLDAISSWWVNMFGHANPRINSALRSQLDMLEHAMLAGFTHEPV 98 Query: 106 LELAERLLATVSETALAHLMLTCTGSEANDLAYRIA--KVRTGGVG----VIVTDTAYHG 159 ++L+E+L A + L H G+ A ++A +++ R G+ + +YHG Sbjct: 99 VQLSEQLAARTNHE-LGHCFYASDGASAVEIALKMSFHSWRNNGLSDKREFVCLKGSYHG 157 Query: 160 -------ITDAVSQFSPSLGTTVNLGAHVRLVPAPRSYH--AEGADLGERFTRDVEAAIA 210 +TD V F + + AHV + P R+ AD+ R +E + Sbjct: 158 ETIGALAVTD-VPIFRDAYDAMLQ-HAHVVMSPDARAARDGETAADVARRAASALETLLQ 215 Query: 211 DLKRHGIQPAALIVDSLF-TSDGILPGPEGFLKGAVEAIKRAGGLFIADEVQPGFGRTGE 269 + +H AALIV+ L + G+ +L+ + IADE+ G GRTG Sbjct: 216 ERSKH---IAALIVEPLVQCATGMAMYDPVYLQEVRALCDKYQVHLIADEIAVGCGRTGT 272 Query: 270 HMWGFQRHGVIPDIVTMGKPMGNGQ-PVAGLLATADVLQEF--GQRSRYF---NTFGGNT 323 + ++ V PD + + K + G P++ ++ ++ Q F G +R F +++ GN Sbjct: 273 -FFACEQAAVWPDFLCLSKGISGGYLPLSLVMTRDEIYQSFYHGDVTRGFLHSHSYTGNP 331 Query: 324 VSCAAALAVLKTIENEALIAHAQQVGSVLLNGLSALAERHAAIGDVRGAGMFVGVELVTD 383 ++C AALA L E + +I + + L L+ LA H + + R GM + V D Sbjct: 332 LACRAALATLAIFEEDDVINANRLRAARLTEALAPLAA-HPQVSNFRQRGMIWAFDAVID 390 >gi|152979840|ref|YP_001354649.1| glutamate-1-semialdehyde 2,1-aminomutase [Janthinobacterium sp. Marseille] Length = 432 Score = 89.4 bits (220), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 106/397 (26%), Positives = 166/397 (41%), Gaps = 46/397 (11%) Query: 39 AYRLMYEHPLHIVRGEGVWLIDPQGRRYLDVYNNVTS--LGHCHPAVTEAICTQVQTLAT 96 A+R + P I + EG + D RRY+D + +GH HP V +A VQ AT Sbjct: 26 AFRSVGGTPRFITKAEGPYFWDADDRRYIDYIGSWGPAIVGHAHPDVVKA----VQDAAT 81 Query: 97 NTRYL---HETILELAERLLATVSETALAHLMLTCTGSEANDLAYRIAKVRTGGVGVIVT 153 E +E+AE + V ++ + L +G+EA A R+A+ TG +I Sbjct: 82 RGLSFGAPTEAEIEMAELICRLVP--SIEQVRLVSSGTEAAMSALRLARGATGRDKIIKF 139 Query: 154 DTAYHGITDAVSQFSPSLGTTVNLGAHVRLVPAPRSYHAEGADLGERFTR--------DV 205 + YHG D++ V G+ + P S A + E F + D Sbjct: 140 EGCYHGHADSL---------LVKAGSGLLTFGNPTS-----AGVPEDFAKHTLVLDYNDP 185 Query: 206 EAAIADLKRHGIQPAALIVDSLFTSDGILPGPEGFLKGAVEAIKRAGGLFIADEVQPGFG 265 K G A +IV+ + + +LP FL+ + G + I DEV GF Sbjct: 186 AQLENVFKEMGDSIACVIVEPVAGNMNLLPATPEFLQTMRRVCTQYGAVMILDEVMSGF- 244 Query: 266 RTGEHMWGFQR-HGVIPDIVTMGKPMGNGQPVAGLLATADVLQEFGQRSRYFN--TFGGN 322 R + G Q +G+ PD+ +GK +G G PVA AD+++ + T GN Sbjct: 245 RVA--LGGAQSLYGITPDLTVLGKVIGGGLPVAAFGGRADIMRHLAPLGGVYQAGTLSGN 302 Query: 323 TVSCAAALAVLKTIENEALIAHAQQVGSVLLNGLSALAERHAAIGDVRGA-----GMFVG 377 V+ AA +A LK I+ + + L++G SA A R A I + G++ Sbjct: 303 PVTVAAGMATLKLIQAPGFYENLTAQTTKLVHGFSA-AAREADIAFCANSVGGMFGLYFA 361 Query: 378 VELVTDRHTRAP-DRSLTSEVVNRMRQKGVLLSACAM 413 E+ T D++ + + M GV L+ A Sbjct: 362 SEVPVSYDTMMKCDKTRFNAFFHAMLDAGVYLAPSAF 398 >gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transaminase [Janthinobacterium sp. Marseille] Length = 439 Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 110/422 (26%), Positives = 175/422 (41%), Gaps = 44/422 (10%) Query: 39 AYRLMYEHPLHIVRGEGVWLIDPQGRRYLDVYNNVTSL--GHCHPAVTEAICTQVQTLAT 96 A R P +V G++ GR+ LD + + GH HP +TEAI Q ++ Sbjct: 16 ANRQFKAKPRMLVAASGMYYTSDDGRQILDGTAGLWCVNAGHGHPKITEAIQKQAASMDY 75 Query: 97 NTRYL--HETILELAERLLATVSETALAHLMLTCTGSEANDLAYRIA----KVR--TGGV 148 + H E A LA ++ L + GSE D A +IA ++R G Sbjct: 76 APLFQIGHPLAFE-AATALAEIAPAGLNRVFFCNDGSEGVDTALKIALAYHRIRGDAGRT 134 Query: 149 GVIVTDTAYHGITDAV----------SQFSPSLGTTVNLGAHVR-LVPAPRSYHAEGADL 197 +I + AYHG+ QF P L H+R + ++ ++ G L Sbjct: 135 RLIGRERAYHGVGFGGIAVGGIAGNRKQFGPGLAAD-----HLRHPLDIAKNAYSRGLPL 189 Query: 198 -GERFTRDVEAAIADLKRHGIQPAALIVDSLFTSDGILPGPEGFLKGAVEAIKRAGGLFI 256 G ++E + L AA+IV+ L S G++ P+G+L+ + G L I Sbjct: 190 HGAEMADELEQRLLALHDPSTV-AAVIVEPLQGSTGVILPPKGYLEKLRVICDKHGVLLI 248 Query: 257 ADEVQPGFGRTGEHMWGFQRHGVIPDIVTMGKPMGNGQ-PVAGLLATADVLQEFGQRS-- 313 DEV GFGR G +G GV PD++ K + N P+ ++ + + F Q + Sbjct: 249 FDEVITGFGRLGT-AFGADFFGVKPDMIVCAKALTNAAVPMGAVIVHEKIHETFMQMAPA 307 Query: 314 ---RYFN--TFGGNTVSCAAALAVLKTIENEALIAHAQQVGSVLLNGLSALAERHAAIGD 368 F+ T+ G+ ++ AAA+A L E L A + + +L + + D Sbjct: 308 DSIELFHGYTYSGHPLAAAAAIATLDVYREEQLFQRAAGMAPYFEDAAHSL-KGLPFVKD 366 Query: 369 VRGAGMFVGVELVTDRHTRAPDRSLTSEVVNRMRQKGVLLSACAMGHNVLKIRPPLVLTA 428 VR G+ GVEL + P KG+L A ++L + PPL++ Sbjct: 367 VRNLGLVAGVEL--EGIAGKPGARAYELFTKAFWDKGLLTRVTA---DILALSPPLIINK 421 Query: 429 QQ 430 Q Sbjct: 422 AQ 423 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.320 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,087,884 Number of extensions: 49304 Number of successful extensions: 171 Number of sequences better than 1.0e-08: 6 Number of HSP's gapped: 162 Number of HSP's successfully gapped: 6 Length of query: 450 Length of database: 1,221,021 Length adjustment: 86 Effective length of query: 364 Effective length of database: 903,079 Effective search space: 328720756 Effective search space used: 328720756 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)