BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0237.p
         (254 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982214|ref|YP_001353072.1| enoyl-CoA hydratase [Janthinoba...   120   6e-29
gi|152980360|ref|YP_001351930.1| enoyl-CoA hydratase [Janthinoba...   102   3e-23

>gi|152982214|ref|YP_001353072.1| enoyl-CoA hydratase
           [Janthinobacterium sp. Marseille]
          Length = 269

 Score =  120 bits (302), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 127/256 (49%), Gaps = 6/256 (2%)

Query: 2   DIQLTKADGILTIHFDREDKKNAITAAMYQQLADALKDAETDSAVRAILFTGKPQAFSAG 61
           +IQ ++ +  L +       KNA+   M+    + L  AE D ++RA++ TG    F AG
Sbjct: 14  EIQASRHEATLILTISNPGAKNALHPDMFAAAVEVLSTAERDDSIRAVILTGADNFFCAG 73

Query: 62  NDLEDFLKHPP--KTQDAPVFQFL--W--QISHASKPIVAAVAGVAVGIGTTLLLHCDLV 115
            +L   L+H    K+Q       L  W   I    KP++AAV G A G G +L L CDL+
Sbjct: 74  GNLNKLLEHRAIDKSQQGDAVDSLRSWIEAIRDCPKPVIAAVEGAAAGAGFSLALACDLI 133

Query: 116 YAADNAKFSMPFTQLGLCPEAASSLLLPHIAGYQRAAEKLLLGEAFGADEACQMGFVNRV 175
            A +N+KF+M ++++GL P+  +S  L      Q A E LL G+A  A    ++G +NR+
Sbjct: 134 VAGNNSKFAMSYSRVGLTPDGGASWFLTQALPRQLATEILLEGKAVAATRLHELGLINRL 193

Query: 176 MPVEELLAYAHKQAAKLAALPAASIRLTKQLMKKNRVTATEQQMVVEIEHFSRMLTEPEA 235
           +     L  A + A +LA L   ++   K L+++       Q    E  HF   L   +A
Sbjct: 194 VADGTTLDAAQQWADELAELSGHAVERIKSLVREGGSNTLAQHFESEKFHFVESLNHRDA 253

Query: 236 KEAFTAFFEKRKPDFR 251
            E   AF EKRKP ++
Sbjct: 254 LEGINAFLEKRKPHYK 269


>gi|152980360|ref|YP_001351930.1| enoyl-CoA hydratase
           [Janthinobacterium sp. Marseille]
          Length = 258

 Score =  102 bits (253), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 18/252 (7%)

Query: 10  GILTIHFDREDKKNAITAAMYQQLADALKDAETDSAVRAILFTGKPQAFSAGNDLE---- 65
           G++T+  +R    NA+   +  +L  AL+  + D  +  ++ TG  +AF+AG D+     
Sbjct: 15  GVITL--NRPAALNALNDKLMDELGLALQSFDGDDDIGCMIITGSEKAFAAGADIGAMAT 72

Query: 66  ----DFLKHPPKTQDAPVFQFLW-QISHASKPIVAAVAGVAVGIGTTLLLHCDLVYAADN 120
               D  K    T++       W QI    KP++AAVAG A+G G  L + CD + AAD 
Sbjct: 73  YTYMDVYKGDYITRN-------WEQIRSVRKPVIAAVAGYALGGGCELAMMCDFIIAADT 125

Query: 121 AKFSMPFTQLGLCPEAASSLLLPHIAGYQRAAEKLLLGEAFGADEACQMGFVNRVMPVEE 180
           AKF  P  +LG+ P A  +  LP      +A +  L      A EA + G V+RV+  ++
Sbjct: 126 AKFGQPEIKLGIIPGAGGTQRLPRAVSKSKAMDLCLTARMMDAAEAERAGLVSRVVAADK 185

Query: 181 LLAYAHKQAAKLAALPAASIRLTKQLMKKNRVTATEQQMVVEIEHFSRMLTEPEAKEAFT 240
           L   A   A  +A +    + + K+ + +   T   + +  E   F       + KE   
Sbjct: 186 LHEEALAAATVIANMSLPMVMMVKESINRAYETTLAEGVQFERRLFHSTFATADQKEGMQ 245

Query: 241 AFFEKRKPDFRQ 252
           AF EKR   F+ 
Sbjct: 246 AFIEKRAAHFKN 257


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.132    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 472,522
Number of extensions: 15565
Number of successful extensions: 61
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 59
Number of HSP's successfully gapped: 2
Length of query: 254
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 173
Effective length of database: 921,564
Effective search space: 159430572
Effective search space used: 159430572
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)