BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0231.p
         (124 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981918|ref|YP_001354782.1| heat shock protein 15 [Janthino...   158   7e-41

>gi|152981918|ref|YP_001354782.1| heat shock protein 15
           [Janthinobacterium sp. Marseille]
          Length = 126

 Score =  158 bits (400), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 94/122 (77%)

Query: 2   DTTRIDKWCWAARFFKTRSQATEAVDRGRIKLNGERTKPAHNVKTGDRLQIDNGSTEWEV 61
           +  R+DKW WAARFFKTRS AT+AVD+G+++L  ER KPA  VK GD LQIDNGST WEV
Sbjct: 4   ENVRLDKWLWAARFFKTRSLATDAVDKGKVRLEQERIKPARTVKCGDLLQIDNGSTVWEV 63

Query: 62  LVTGIADKRGSAAIAATLYQESEESLARRAAQAERHRLFREPSAEIKGRPTKRDRRLLDR 121
           +V  ++D RGSA +A  LY E+E+SL +R   A++ + FREP   IKGRPTKRDRRLLD+
Sbjct: 64  VVQALSDVRGSAEMAQKLYAETEQSLKQRQQDADQRKFFREPGLGIKGRPTKRDRRLLDK 123

Query: 122 SS 123
           ++
Sbjct: 124 TN 125


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.316    0.128    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 241,564
Number of extensions: 8452
Number of successful extensions: 26
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 1,221,021
Length adjustment: 73
Effective length of query: 51
Effective length of database: 951,140
Effective search space: 48508140
Effective search space used: 48508140
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 124 (52.4 bits)