BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0216.p
         (391 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981328|ref|YP_001354786.1| cardiolipin synthetase II [Jant...   435   e-123
gi|152980231|ref|YP_001353250.1| phospholipase D family protein ...   144   9e-36

>gi|152981328|ref|YP_001354786.1| cardiolipin synthetase II
           [Janthinobacterium sp. Marseille]
          Length = 388

 Score =  435 bits (1119), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 217/385 (56%), Positives = 267/385 (69%)

Query: 5   LRHLTFTDGNQIALLHSGAGFYPALINAIETARVEIYLETYIFSLDETGLLVCEALQRAA 64
           +R ++FT  N I LLH G  ++PALI A + A  EIYLETYIF+ D T  L+ EAL RAA
Sbjct: 1   MRSVSFTGNNDIQLLHCGGEYFPALIEAFDKANQEIYLETYIFADDATSHLIKEALIRAA 60

Query: 65  GRGVVVYVINDWLGTGRENTKKLHLALSAAGVQHRSFNPWFRRGVARSHRKLCVVDRQVA 124
            RGV+V V+ DWLGTG + +  LH      GV HRSFNP F RG+AR HRK+CVVDR  A
Sbjct: 61  QRGVIVNVLTDWLGTGNKESALLHREFEKHGVVHRSFNPLFIRGIARMHRKVCVVDRVEA 120

Query: 125 FVGGLNINDDMVSDRDHVTPLPAPRWDFAVSIIGPLVQEVYREVQAQWLRVGHMKLKARW 184
           F+GGLNI DDM  D D    LPAPRWDFAV + GPLV  ++ EV   W R+G + L+ RW
Sbjct: 121 FLGGLNIVDDMHDDGDVNIALPAPRWDFAVRVTGPLVATIHWEVAVHWARLGSLSLRTRW 180

Query: 185 RNFKRLRHGHPGPVHDQTQAALVVRDNFRNRRTIQRAYLQALGRARETAFLANPYFAPGR 244
             FK LR   P        A LV+RDN R+RRTIQ AYL+ALG AR +A LANPYFAPGR
Sbjct: 181 ATFKELRQNKPSDARGPMIAGLVMRDNLRHRRTIQAAYLKALGTARHSALLANPYFAPGR 240

Query: 245 KMRRALEEAALRGVKVTLLLGVGQFVMQDAVAHSFYPKLLRAGVRIVEYTHTELHAKVAV 304
           K+R  L +AA+RGV VTLLLG+G +  QD VA SFY +LL+AGV+IVEY  T LH KVAV
Sbjct: 241 KLRNGLAQAAMRGVDVTLLLGIGHYRFQDVVARSFYRRLLKAGVKIVEYRKTHLHGKVAV 300

Query: 305 IDDKWSTVGSSNYDGLSLFVNQEANVVIQDAAFAGYLRQEIEAGAAHGRVVHLADFLHVP 364
           IDD W+TVGSSN DG SLF+NQEANVV+ D  FA  LR  IE G A G V++  ++ ++P
Sbjct: 301 IDDTWATVGSSNCDGFSLFLNQEANVVVLDTEFAQKLRVHIEQGIADGVVMNWEEYANIP 360

Query: 365 WYKRAAYGAAFLLYRTVIHIITLGK 389
            YKR  Y  ++ +Y+ ++ ++T GK
Sbjct: 361 LYKRIFYRFSYFIYKNLMRVMTWGK 385


>gi|152980231|ref|YP_001353250.1| phospholipase D family protein
           [Janthinobacterium sp. Marseille]
          Length = 462

 Score =  144 bits (363), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 171/372 (45%), Gaps = 29/372 (7%)

Query: 13  GNQIALLHSGAGFYPALINAIETARVEIYLETYIFSLDETGLLVCEALQRAAGRGVVVYV 72
           GN++ LL+ G     A+I AI TA+  I LETYIF+ D  G    + L +    GV V +
Sbjct: 91  GNKLTLLNDGPDTLRAMIAAIRTAKDHINLETYIFNEDAIGTEFADLLMQKQRDGVQVNI 150

Query: 73  INDWLGTGRENTKKLHLALSAAGVQHRSFNPW--FRRGVA-----RSHRKLCVVDRQVAF 125
           I D +G+      +    L  +G+    F+P   F+R ++     R HRK+ VVD +VAF
Sbjct: 151 IYDSIGS-LSTPPEFFQKLRDSGINLLEFSPVNPFKRALSTRLNNRDHRKILVVDGRVAF 209

Query: 126 VGGLNINDDMVSD---RDHVTPLPAPRW-DFAVSIIGPLVQEVYREVQAQWLRVGHMKLK 181
            GG+NI+ D  S    R          W D  + + GP V         QWL        
Sbjct: 210 TGGINISSDYSSKSLFRSSKKKDDELGWRDTHIQVEGPAVASF------QWL------FM 257

Query: 182 ARWRNFKR----LRHGHPGPVHDQTQAALVVRDNFRNRRTIQRAYLQALGRARETAFLAN 237
             W + K      R+  P       +   V+         + +AY+ A+  A+ +  + N
Sbjct: 258 QTWVSQKTDSLATRNYFPPLTRMGDKVVRVIGSEPGGNYEVYKAYVLAMQEAKVSIHVTN 317

Query: 238 PYFAPGRKMRRALEEAALRGVKVTLLL-GVGQFVMQDAVAHSFYPKLLRAGVRIVEYTHT 296
            YF P  ++ +AL +AA RGV V ++  G+    +      S+Y +LL AGVR+ E   +
Sbjct: 318 AYFVPDVQLVKALTDAARRGVDVKMVFPGMSDVGLIMHAGRSYYSELLAAGVRVFELQAS 377

Query: 297 ELHAKVAVIDDKWSTVGSSNYDGLSLFVNQEANVVIQDAAFAGYLRQEIEAGAAHGRVVH 356
            LHAK AVID  WSTVGS+N D  S   N+E N++  D AF   +         +   + 
Sbjct: 378 VLHAKTAVIDGYWSTVGSTNLDMRSFLHNREVNLIALDKAFGDVMESTFNEDLKNSIEIK 437

Query: 357 LADFLHVPWYKR 368
             ++   P+  R
Sbjct: 438 PEEWAQRPFSNR 449


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.325    0.139    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 939,856
Number of extensions: 39009
Number of successful extensions: 157
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 154
Number of HSP's successfully gapped: 2
Length of query: 391
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 306
Effective length of database: 906,776
Effective search space: 277473456
Effective search space used: 277473456
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 130 (54.7 bits)