BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0174.p
         (473 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981371|ref|YP_001354913.1| M23/M37 familypeptidase [Janthi...   560   e-161
gi|152980876|ref|YP_001353825.1| lipoprotein nlpD precursor [Jan...    75   8e-15
gi|152981693|ref|YP_001354696.1| M23B family peptidase [Janthino...    68   1e-12

>gi|152981371|ref|YP_001354913.1| M23/M37 familypeptidase
           [Janthinobacterium sp. Marseille]
          Length = 466

 Score =  560 bits (1444), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 307/468 (65%), Positives = 367/468 (78%), Gaps = 18/468 (3%)

Query: 10  LRALAAIGVGCL---LCAAVQAQPITERTKQKQAAEKEQADLQQRLANLKRDIDKTETAK 66
           +R  AAI    L   L  A  AQ  T+R+KQK+ AE E+ADL+Q+L  LKR IDKTETAK
Sbjct: 13  MRVFAAITALVLTFGLMGAAHAQKATDRSKQKKVAETERADLRQKLNTLKRSIDKTETAK 72

Query: 67  DNAADALSASEQAISKANRSLRDLAQEQQATEARLAQLVKQLNELTALVNAQQAQLSKLL 126
             AADAL+ SE+AIS A R+L DLAQEQ+ TEA+L  L KQ   L  +V AQQ QL+KLL
Sbjct: 73  SYAADALAKSEEAISDAKRNLNDLAQEQRQTEAKLGDLSKQQAALKKVVEAQQEQLAKLL 132

Query: 127 REQYVAGNEDRIKLLLSGDNPNRINRELQYMGYVSQAQAKLIETLRANQQAIRANKADTQ 186
           REQYVAGNEDRIKLLLSGDNPNRINRELQYMGYVS+AQA LIE+LRAN  AI  N+A+ Q
Sbjct: 133 REQYVAGNEDRIKLLLSGDNPNRINRELQYMGYVSRAQATLIESLRANLAAIEENQAEVQ 192

Query: 187 NAKFELEEIAQEELEQKKVLEREKGRRQTLLSQLSTKLNAQRQEAGRLEQDQQRLSSLVD 246
           NAK EL+EIA E  EQ  +L++EK +R  LL+QLS+KL AQR+E G +E+D++RLSSLVD
Sbjct: 193 NAKLELDEIAAEAREQHAILQKEKAQRSALLAQLSSKLAAQRKEVGNIERDERRLSSLVD 252

Query: 247 KLAQIIEQQKKAEAEAREKRRQEQLAKAKAEREKRLAEQRAR-AEKRAAEAAKAAKEGKP 305
           KLA +I++Q+KAEA A EKRRQE+ A+A+AEREKRLA+ + R    RAA           
Sbjct: 253 KLAVLIQEQRKAEAAAAEKRRQERAARAQAEREKRLAQAKTRNTPDRAANG--------- 303

Query: 306 APKTPDPADAIDDDEPPQSASLGRNDTLPEPSDNFGKPFASLRGQLHLPVKGELVSKFGS 365
             K  +P DAI+DDEPP S SL RN+  P+ S   G  FA+LRG+L LPV+G+L++KFGS
Sbjct: 304 --KISNP-DAIEDDEPP-SKSLARNELTPDASVQDG-AFAALRGRLRLPVRGDLIAKFGS 358

Query: 366 RRGDGPTSRGLFIRAQEGSEVRAVAAGRVVFADWLRGFGNLIIVDHGNQYMTIYGNNQSV 425
           +RG+GP  +GLFIRA+EGSEV+AVAAGRVVFA+WLRGFGNLIIVDHG+QYMTIYGNNQSV
Sbjct: 359 KRGEGPNWKGLFIRAEEGSEVKAVAAGRVVFAEWLRGFGNLIIVDHGSQYMTIYGNNQSV 418

Query: 426 LKRAGDLVKAGETIATAGNSGGNEQSGLYFEMRYQGRAFDPLGWVTSR 473
           LK AGD VK+G+ IA+ GNSGGNEQSGLYFEMR+QGRAFDPL WVT R
Sbjct: 419 LKHAGDTVKSGDVIASTGNSGGNEQSGLYFEMRHQGRAFDPLSWVTIR 466


>gi|152980876|ref|YP_001353825.1| lipoprotein nlpD precursor
           [Janthinobacterium sp. Marseille]
          Length = 317

 Score = 75.1 bits (183), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 8/122 (6%)

Query: 353 LPVKGELVSKFGSRRGDGPTSRGLFIRAQEGSEVRAVAAGRVVFA-DWLRGFGNLIIVDH 411
            P +G++V  F   R      +GL I  + G  V A  AG+V++A   +RG+GNL+IV H
Sbjct: 203 WPAEGKVVGTFDDGR------KGLDIAGKSGQAVLAAGAGKVMYAGSGIRGYGNLVIVKH 256

Query: 412 GNQYMTIYGNNQSVLKRAGDLVKAGETIATAGNSGGNEQSGLYFEMRYQGRAFDPLGWVT 471
            +  ++ Y +N+++L + G  V  G+ IA  G+S  ++   L+FE+R QG+  DP  ++ 
Sbjct: 257 TSNLLSAYAHNKAILVKEGQNVNKGQKIAEMGDS-DSDSVKLHFEIRQQGKPVDPSKFLP 315

Query: 472 SR 473
           SR
Sbjct: 316 SR 317


>gi|152981693|ref|YP_001354696.1| M23B family peptidase
           [Janthinobacterium sp. Marseille]
          Length = 314

 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 4/110 (3%)

Query: 361 SKFGSR----RGDGPTSRGLFIRAQEGSEVRAVAAGRVVFADWLRGFGNLIIVDHGNQYM 416
           S FG R     G      G+   A  G+ + A A G V  A++   +GN++ +DHGN  +
Sbjct: 189 STFGRRLDPFSGRSAMHEGIDFAAPIGTPIVAAAGGVVTVAEFHPQYGNMMEIDHGNDMI 248

Query: 417 TIYGNNQSVLKRAGDLVKAGETIATAGNSGGNEQSGLYFEMRYQGRAFDP 466
           T Y +   +L + GD+V+ G+ IA  G +G +    L+FE+R +G A DP
Sbjct: 249 TRYAHTSRLLMQVGDIVRRGQHIADIGTTGRSTGPHLHFEVRVKGVAQDP 298


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.312    0.127    0.341 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 756,117
Number of extensions: 25497
Number of successful extensions: 162
Number of sequences better than 1.0e-08: 4
Number of HSP's gapped: 152
Number of HSP's successfully gapped: 7
Length of query: 473
Length of database: 1,221,021
Length adjustment: 87
Effective length of query: 386
Effective length of database: 899,382
Effective search space: 347161452
Effective search space used: 347161452
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 131 (55.1 bits)