BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0171.p
         (86 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152983314|ref|YP_001354910.1| glutaredoxin 3 [Janthinobacteri...   140   1e-35

>gi|152983314|ref|YP_001354910.1| glutaredoxin 3
          [Janthinobacterium sp. Marseille]
          Length = 87

 Score =  140 bits (354), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 73/86 (84%)

Query: 1  MSAPVTMYCTAVCPYCMMAERLLASKGITQIDKIRVDLDPQQRELMMQKTGRRTVPQIYV 60
          M+A V MY T VCPYC MAERLL +KGI  I+KIR+DLDP QR  MM+KTGRRTVPQIYV
Sbjct: 1  MTAHVVMYSTGVCPYCTMAERLLTAKGIANIEKIRIDLDPAQRVAMMEKTGRRTVPQIYV 60

Query: 61 GDTHVGGFDDLSALDRAGKLDPLLQA 86
          GDTHVGGFDDL+AL+R GKLD LLQ+
Sbjct: 61 GDTHVGGFDDLNALERQGKLDALLQS 86


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.324    0.137    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 189,167
Number of extensions: 6281
Number of successful extensions: 27
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 86
Length of database: 1,221,021
Length adjustment: 56
Effective length of query: 30
Effective length of database: 1,013,989
Effective search space: 30419670
Effective search space used: 30419670
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 122 (51.6 bits)