BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0158.p
         (153 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981891|ref|YP_001355024.1| hypothetical protein mma_3334 [...   123   4e-30
gi|152981859|ref|YP_001352921.1| hypothetical protein mma_1231 [...   117   3e-28

>gi|152981891|ref|YP_001355024.1| hypothetical protein mma_3334
           [Janthinobacterium sp. Marseille]
          Length = 143

 Score =  123 bits (309), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 89/140 (63%), Gaps = 2/140 (1%)

Query: 7   RLPHAKLAAPAFNALIKASEAVHQSGIDPKLVELVFLRVSQLNGCAFCADMHSHELLQKG 66
           RL +  L+  A+       +A+ +S +  +L+ELV+LR+SQ+NGCAFC +MH+  L   G
Sbjct: 5   RLSYWTLSPEAYQGFAATKKALEKSSLGKQLIELVWLRMSQINGCAFCLEMHAKALRADG 64

Query: 67  EDQQRLNTLATWREIPFFTDAERAALNWAERFTHLHQPDGEKEDAAFALLQQHFSDTEIA 126
               +L++LA WR    FT+ E AAL W E  TH+ +     ED  F  L+ HF+D EIA
Sbjct: 65  VKDAKLDSLAGWRVSALFTEREAAALAWTESLTHVDKTHAPDED--FEPLKAHFTDVEIA 122

Query: 127 NLSFAVAIINAWNRLGVAMR 146
           +LSFA+A+++A+NRL + MR
Sbjct: 123 DLSFAIALMSAFNRLAIGMR 142


>gi|152981859|ref|YP_001352921.1| hypothetical protein mma_1231
           [Janthinobacterium sp. Marseille]
          Length = 145

 Score =  117 bits (293), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 2/143 (1%)

Query: 4   FKQRLPHAKLAAPAFNALIKASEAVHQSGIDPKLVELVFLRVSQLNGCAFCADMHSHELL 63
            + RL        A  A++     + +  +D  L ELV LR SQ+NGCAFC DMHS +  
Sbjct: 1   MQTRLDFLATDKDAIRAMMGVENQIAKGTLDILLKELVRLRASQINGCAFCLDMHSTDAR 60

Query: 64  QKGEDQQRLNTLATWREIPFFTDAERAALNWAERFTHLHQPDGEKEDAAFALLQQHFSDT 123
           + GE  +RL T+A WRE PFF++ ERAAL W E  T + Q      DA + +++ HF+D 
Sbjct: 61  KAGETDRRLATVAAWREAPFFSEKERAALEWTESLTLVAQT--HVPDAVWEIVRPHFTDA 118

Query: 124 EIANLSFAVAIINAWNRLGVAMR 146
           E+  L+  +  IN+WNR  +A R
Sbjct: 119 ELVELTLLITSINSWNRFSIAFR 141


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.133    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 345,108
Number of extensions: 12256
Number of successful extensions: 31
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 2
Length of query: 153
Length of database: 1,221,021
Length adjustment: 76
Effective length of query: 77
Effective length of database: 940,049
Effective search space: 72383773
Effective search space used: 72383773
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 125 (52.8 bits)