BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0116.p (752 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980421|ref|YP_001355108.1| TonB-dependent haemoglobin/tran... 893 0.0 gi|152981258|ref|YP_001355221.1| outer membrane receptor [Janthi... 72 1e-13 gi|152982445|ref|YP_001353714.1| ferric siderophore receptor out... 69 8e-13 gi|152981136|ref|YP_001355272.1| outer membrane receptor for fer... 69 1e-12 gi|152982776|ref|YP_001354901.1| outer membrane hemin receptor [... 58 2e-09 >gi|152980421|ref|YP_001355108.1| TonB-dependent haemoglobin/transferrin/lactoferrin receptor [Janthinobacterium sp. Marseille] Length = 754 Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/764 (58%), Positives = 563/764 (73%), Gaps = 30/764 (3%) Query: 5 KSRCAAAVLMALQQWLCAGAFAQSADVNSNPASVSGRKLQDVVVTANRAGSTDLDHAAAT 64 K + A A ++ LQQW A AQ KL ++ VT+ R D++ AAAT Sbjct: 5 KKKLALATVLVLQQWPVHQAGAQQI-----------AKLDEITVTSTRGLGGDINRAAAT 53 Query: 65 VSVITSQEMEEHNTKDIKDALRYEPGVEVRRSVYRMSGITGASATTGRGGNEGITMRGLD 124 VSV+T++E+E+ N KDIKDALRYEPGVEVRRSV R SGI+GA AT GRGGNEGIT+RGLD Sbjct: 54 VSVVTAEEIEQQNAKDIKDALRYEPGVEVRRSVARTSGISGAGATAGRGGNEGITIRGLD 113 Query: 125 GNRVLMLEDGIVMPRAFSQGVASVGRGATTDTELYRRIEVLRGPASSLYGSDGLTGAINF 184 GNRVL+LEDG+ +PRAFS G S GRG+ +T+LY+RIEVLRGPASS+YGSDGLTGA+NF Sbjct: 114 GNRVLLLEDGVPVPRAFSVGTLSAGRGSYLNTDLYQRIEVLRGPASSMYGSDGLTGAVNF 173 Query: 185 ITKDPADLLGVYGKSTYFSFKPSYDSVDKSFGATASTAWGGEQWQGMLILNTRHGNQADN 244 + KDP D L ++ KSTYFS +PSYDSVD SFG + + A GGE+WQGM++LN RHG + DN Sbjct: 174 VMKDPQDYLNIFNKSTYFSVRPSYDSVDNSFGTSGTFAVGGERWQGMVLLNARHGKETDN 233 Query: 245 KGTNDVLGTARTTPDPMSYTNRSALGKLVFKPNGVDSFKLTLQATEERDSGDSLSAL--- 301 KG D+ GT RT PDP++Y +SALG++VF+ D FK TL TE + +G S SA+ Sbjct: 234 KGDRDITGTNRTAPDPLTYDTQSALGRVVFRATANDVFKWTLATTENKTAGSSPSAIGPA 293 Query: 302 ANG--VTAYSTSSKSTGQRATLAYEHVDPDQPWMQKFKANLYYRNADTDQYTFEAGASSR 359 A G VT Y T+SK R T AYE D D P +QK +AN++YR+A+T+QYTFE+G Sbjct: 294 AGGTFVTGYQTTSKVQSDRFTFAYERDDADNPVVQKIRANVFYRDANTNQYTFESGTGP- 352 Query: 360 TIVRPRFRDVSYSDQMIGGGLLGESNFGPDGWRHKLVYGLDLSLSTLQTSANGTGWTSCT 419 RPRFRDV+Y DQ +GGG++ ES+F G +++LVYG D+S S L A GTGW+SCT Sbjct: 353 --TRPRFRDVTYKDQAVGGGVMAESSFNVGGIKNQLVYGFDVSKSQLSQQATGTGWSSCT 410 Query: 420 GTQYCQYFPKTEYTQLGAYVQDEMRTGALTTIAGLRLDSYELKPKASAKYDAQASANGQP 479 GTQYC+ FPKT Y+ GAYVQD++R G L+ I GLR DSYEL PKASA+YDAQA+ANGQP Sbjct: 411 GTQYCELFPKTNYSIFGAYVQDDIRIGKLSVIPGLRYDSYELDPKASARYDAQANANGQP 470 Query: 480 AVSSRDSAFSPRLAFLYEVTPAFIPYIQYARGFRSPSPQEVNSFFNNT-----VYRQVSN 534 A S+D+A SPRLAFLYEVTPAF+PY QYARGFR+PSP EVNS+FNN Y Q++N Sbjct: 471 AARSKDNAISPRLAFLYEVTPAFVPYAQYARGFRAPSPHEVNSYFNNVGVPGGSYMQIAN 530 Query: 535 PDLKPETSNTVEVGLRGKLAAGGGSLRYSAAAYKGNYRNFIDLVTVGGNLTVANPTIFQY 594 PDLK ETSN+ E+GLRGK+ +RYSAAA+ G Y+NFI+LV +GGN VA P I QY Sbjct: 531 PDLKAETSNSYEIGLRGKVDLADSRVRYSAAAFAGRYKNFIELVQIGGNFQVATPAINQY 590 Query: 595 RNAAKAEIHGLEGRIDYAMDNGVSLKGGVAWTKG-TTTANGVEQGLESVAPLSLVTGVRY 653 N+++A IHG+E R+D+ ++G +L+GG A+T+G + NGV+ GL+SVAPLS+VTG+RY Sbjct: 591 INSSRANIHGVEARVDWRWNDGWTLRGGFAYTQGDSINRNGVKTGLDSVAPLSVVTGLRY 650 Query: 654 EPTSTWFVQSDLIYNAAKKKADIP-----TSTNFVSPAFFVMDLSGGYHLSRNMTLYAGI 708 EP TWFVQ DLIY AAKK+ D+ T F +F ++D+ GY +++N++ AG+ Sbjct: 651 EPNQTWFVQGDLIYAAAKKRGDLANPNVGTQPAFTPSSFAILDIFSGYRVNKNVSFNAGV 710 Query: 709 RNLFDRKYWSWTDIRGLSLADSAVNKDAYTEPGRSFNLSLKIAY 752 RNLFDRKYW W DIRGL LA +A N DAYT PGRSFN+S+KI Y Sbjct: 711 RNLFDRKYWVWNDIRGLGLASTATNLDAYTSPGRSFNVSMKIEY 754 >gi|152981258|ref|YP_001355221.1| outer membrane receptor [Janthinobacterium sp. Marseille] Length = 718 Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 155/738 (21%), Positives = 296/738 (40%), Gaps = 119/738 (16%) Query: 41 RKLQDVVVTANRAGSTDLDHAAATVSVITSQEMEEHNTKDIKDALRYEPGVEVRRSVYRM 100 + L +VVV+A+ + A A++++IT +++E + + +ALR GV+V Sbjct: 55 QHLAEVVVSAS-GFEQAIKDAPASITIITREQLETNRVNSVAEALRGVEGVDV------- 106 Query: 101 SGITGASATTGRGGNEGITMRGLDGNRVLMLEDGIVMPRAFSQGVASVGRGATTDTEL-- 158 G+ G I+MRG++ L+L DG A S V G G T+ + + Sbjct: 107 ------GDAPGKTGGMNISMRGMNSRFTLILIDGRRQNTAGS--VTPNGFGETSTSFMPP 158 Query: 159 ---YRRIEVLRGPASSLYGSDGLTGAINFITKDPADLL--GVYGKSTYFSFKPSYDSVDK 213 RIEV+RGP S+LYGSD + G IN IT+ + V ++T + Sbjct: 159 PSAIERIEVIRGPMSTLYGSDAMGGVINIITRKVGKVWSGNVTAETTL--------QGES 210 Query: 214 SFGAT--ASTAWGGEQWQGMLILNTR----HGNQADNKGTNDVLGTARTTPDPMSYTNRS 267 FG + S G + + L R H + ++ + + G+ DP+ T + Sbjct: 211 QFGNSQAGSVYLSGPLVENLFGLQVRARRYHRDDSNIQWPGKLPGSLTLGNDPVKSTIDT 270 Query: 268 ALGKLVFKPNGVDSFKLTLQATEER--DSGDSLSAL--ANGVTAYSTSSKSTGQRATLAY 323 A KL F PN + L + ++ + +S L L + Y K + TLA+ Sbjct: 271 AGAKLTFTPNKDNDISLDIDSSRQTYDNSRGQLGTLDKTGAIRGYLPEQKFNRDQVTLAH 330 Query: 324 EHVDPDQPWMQKFKANLYYRNADTDQYTFEAGA-SSRTIVRPRFRDVSYSDQMIGGGLLG 382 + +++L + +T T GA + PR L Sbjct: 331 TLRMAN----SVLESSLSHTKTETIGRTIPDGAPGGKPAGSPRT-------------LES 373 Query: 383 ESNFGPDGWRHKLVYGLDLSLSTLQTSANGTGWTSCTGTQYCQYFPKT-EYTQLGAYVQD 441 ES + KLV LD + ++ G W P+ + Q+G + +D Sbjct: 374 ESTI----FDTKLVTALDTHMLSV-----GAQWWEAKMIDAIA--PRGFDQKQIGVFAED 422 Query: 442 EMRTGA-LTTIAGLRLDSYELKPKASAKYDAQASANGQPAVSSRDSAFSPRLAFLYEVTP 500 E R L G+R D++ S+ A +PR+ ++ T Sbjct: 423 EWRIRKDLALTVGVRHDNH----------------------STFGGATTPRMYLVWNATD 460 Query: 501 AFIPYIQYARGFRSPSPQEVNSFFNNT----VYRQVSNPDLKPETSNTVEVGLRGKLAAG 556 + ++ +R+P +++ + + NP L+PE S + E+G G Sbjct: 461 QWTFKGGVSKAYRTPGLEQLVNGLSGIGGQGTIPLYGNPALQPERSVSSELGTYFDNNKG 520 Query: 557 GGSLRYSAAAYKGNYRNFI----DLVTVGGNLTVANPTIFQYRNAAKAEIHGLE--GRID 610 R +A ++ ++++ I + V GG + P N + A + GLE G ++ Sbjct: 521 ---FRANATIFQTDFKDAISTISNYVPPGGGAQGSFPV-----NVSNATVKGLELGGSLE 572 Query: 611 YAMDNGVSLKGGVAWTKGTTTANGVEQGLESVAPLSLVTGVRYEPTSTWFVQSDLIYNAA 670 +A V+ ++ T AN + + LE+ + + + + + + Y + Sbjct: 573 FARVWRVAANYTYTDSEQKTGAN-IGKPLENTPKHAANVKLDWRTSEQLNLWAQAEYKSE 631 Query: 671 KKKADIPTSTNFVS-----PAFFVMDLSGGYHLSRNMTLYAGIRNLFDRKYWSWTDIRGL 725 + + + ++N + A+ ++++ G Y ++++ + + NL ++ + ++ +R Sbjct: 632 RYRPEDNATSNTKALLGDFKAYTLLNVGGTYKINKSFAINMAVNNLLNKDFVAYRQVRNN 691 Query: 726 SLADSAVNKDAYT-EPGR 742 +S N+ T EP R Sbjct: 692 GNPNSFANQYISTMEPRR 709 >gi|152982445|ref|YP_001353714.1| ferric siderophore receptor outer membrane signal peptide protein [Janthinobacterium sp. Marseille] Length = 823 Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 179/756 (23%), Positives = 304/756 (40%), Gaps = 125/756 (16%) Query: 46 VVVTANRAGSTDLDHAAATVSVITSQEMEEHNTKDIKDALRYEPGVEVRRSVYRMSGITG 105 VVVT R G + L A ++VI QE++ D++ G + ++V G++ Sbjct: 134 VVVTDERMGGS-LAQPARQITVIEGQELD-----DLRAISPNNIGTMLSKAV---PGLSD 184 Query: 106 ASATTGRGGNEGITMRGLDGNRVLMLEDGIVMP--RAFSQGVASVGRGATTDTELYRRIE 163 +S T + G T+RG + L+L DGI + R S+ + ++ D RIE Sbjct: 185 SSRTLT---DFGQTLRGRN---ALILVDGIPLNTNRDSSRNLINI------DPARINRIE 232 Query: 164 VLRGPASSLYGSDGLTGAINFITKDPADLLGVYGKSTYFSFKPSYDSV-DKSFGATASTA 222 VLRG +SS+YGS G +G I +T PA G T S + + + GA Sbjct: 233 VLRG-SSSIYGS-GASGGIISVTTRPAG--GEPVAETTISMNGALSKLGTQGLGAQVQHY 288 Query: 223 WGGEQWQGMLILNTRHGNQADNKGTNDVLGTARTTPDP-----MSYTNRSALGKLVFKPN 277 + G +G ++ + G+ D G R PD S GKL F+ + Sbjct: 289 FSG---KGDVVDYEVDASYRRIGGSYDAHGD-RIAPDASQGDLFDSDTYSLGGKLGFRID 344 Query: 278 GVDSFKLTLQATEERDSGDSLS-----------ALANGVTAYSTSSKSTGQRATLA--YE 324 +L+ + + D S A A + + ++++ + L+ YE Sbjct: 345 SNQRLQLSASYLRAKQNTDYASDPKIATTPIGTATARAIKGLNLANQNEVENTLLSANYE 404 Query: 325 HVDPDQPWMQKFKANLYYRNADTDQYTFEAGASSRTIVRPRFRD-VSYSDQMIGGGLLGE 383 H D + LY R+ T F+A A+ + R D V ++++ GG L + Sbjct: 405 HKDVLGSSLSML---LYGRDNFTRFTPFDARAN---VNRGNNIDQVMQNNKVFGGRLTMD 458 Query: 384 SNFGPDGWRHKLVYGLD-------LSLSTLQTSA-NGTGWTSCTGTQYCQYFPKTEYTQL 435 + P G KL++G D + L +A + +G T Y P + Sbjct: 459 T---PLGSNAKLLWGADFIQERSNMPLDVFDPAAYDASGGLVFRKTGQRTYLPWLTTRSM 515 Query: 436 GAYVQDEMR-TGALTTIAGLRLDSYELKPKASAKYD-----AQASANGQPAVSSRDSAFS 489 GA+ Q + + + GLR YE KASA +D +Q+ + ++ Sbjct: 516 GAFAQLQYKFNEQWSAEGGLR---YE---KASASFDDFQPLSQSKLATPATIKGGKVSYD 569 Query: 490 PRLAFLYEVTPAFIP------YIQYARGFRSPSP----QEVNSFFNNTVYRQVSNPDLKP 539 A ++ F P Y ++GF P + N+ FN +++ L+P Sbjct: 570 ---AVVHNAGLVFKPVKGQEFYGSVSQGFDLPDIGVILRNANATFN------INSSQLEP 620 Query: 540 ETSNTVEVGLRGKLAAGGGSLRYSAAAYKGNYRNFIDLVTVGGNLTVANPTIFQYRNAAK 599 +++ E+G RG+ + + A +R+ DL G + N + R + K Sbjct: 621 VKTDSYELGWRGRFS--------NTMASFAVFRSSSDL----GGVQSFNNGLVLTRTSEK 668 Query: 600 AEIHGLEGRIDYAMDNGVSLKGGV-AWTKGTTTANGVEQGLE----SVAPLSLVTGVRYE 654 I+G+E +DY D+ + GG W +G G +Q + + P+ + V+Y+ Sbjct: 669 --INGVEATVDYYSDDEKWVSGGTFTWMQGRELPQGAKQDQQMTGYRIPPVKVTAYVQYQ 726 Query: 655 PTSTWFVQSDLIYNAAKKKADIPTSTNFVSP---AFFVMDLSGGYHLSRNMTLYAGIRNL 711 P W ++ + AAK T F ++ +DL Y LS+ ++ G+ NL Sbjct: 727 PNERWSNRAQFTWFAAKDYRLADGKTQFARADVDGYYTVDLVSRYKLSKKDSITLGVENL 786 Query: 712 FDRKYWSWTDIRGLSLADSAVNKDAYTEPGRSFNLS 747 F++ Y L S N PG +F LS Sbjct: 787 FNKYYLPLYS----QLIRSGNNNSRLPAPGATFTLS 818 >gi|152981136|ref|YP_001355272.1| outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Janthinobacterium sp. Marseille] Length = 717 Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 83/194 (42%), Gaps = 44/194 (22%) Query: 24 AFAQSADVNSNPASVSGRKLQDVVVTANRAGSTDLDHAAA-------------------T 64 AFAQ D +NPA + L +V VTA S++L H+ A + Sbjct: 22 AFAQQNDNAANPAVTT--TLPEVKVTATDDASSELTHSYAAHAVTVGSKIPQTLRETPQS 79 Query: 65 VSVITSQEMEEHNTKDIKDALRYEPGVEVRRSVYRMSGITGASATTGRGGNEGITMRGLD 124 +SV+T Q M++ N I+D L+ GV V R G G I RG D Sbjct: 80 ISVVTRQRMDDQNITKIEDVLKQTTGVNVTR-------------LDGAGNFNSIQARGFD 126 Query: 125 GNRVLMLEDGIVMPRAFSQGVASVGRGATTDTELYRRIEVLRGPASSLYGSDGLTGAINF 184 + + DG+ A SQG DT +Y RIEVLRGPA L G+ G IN Sbjct: 127 IGTIQL--DGL----AISQGA---NYSTALDTAIYDRIEVLRGPAGLLQGAGEPGGTINL 177 Query: 185 ITKDP-ADLLGVYG 197 + K AD G G Sbjct: 178 VRKRARADFAGSVG 191 >gi|152982776|ref|YP_001354901.1| outer membrane hemin receptor [Janthinobacterium sp. Marseille] Length = 673 Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 33/183 (18%) Query: 5 KSRCAAAVLMALQQWLCAGAFAQSADVNSNPASVSGRKLQDVVVTANRAGSTDLDHAAAT 64 ++ A+AVL AL L A AQ + + L VVVTA+ + + A Sbjct: 5 RTLLASAVLSALAS-LSNSALAQEQE----------KTLPAVVVTASPFSNDESAQIMAP 53 Query: 65 VSVITSQEMEEHNTKDIKDALRYEPGVEVRRSVYRMSGITGASATTGRGGNEGITMRGLD 124 V+ E+ E + D L E GV +++ G G + I +RG++ Sbjct: 54 AKVLYGDELREKLGNSLGDTLSQELGV--------------SASAFGAGASRPI-IRGME 98 Query: 125 GNRVLMLEDGIVMPRA--FSQGVASVGRGATTDTELYRRIEVLRGPASSLYGSDGLTGAI 182 G RV +L++G+ + A S A VG AT R+IE+LRGP++ LYGS + G + Sbjct: 99 GPRVKILQNGMSVMDASSLSNDHAVVGESATA-----RQIEILRGPSALLYGSGAIGGVV 153 Query: 183 NFI 185 N + Sbjct: 154 NIV 156 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.314 0.130 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,809,083 Number of extensions: 80486 Number of successful extensions: 240 Number of sequences better than 1.0e-08: 8 Number of HSP's gapped: 239 Number of HSP's successfully gapped: 8 Length of query: 752 Length of database: 1,221,021 Length adjustment: 90 Effective length of query: 662 Effective length of database: 888,291 Effective search space: 588048642 Effective search space used: 588048642 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 133 (55.8 bits)