BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0104.p
         (379 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980347|ref|YP_001351871.1| homoserine O-acetyltransferase ...   649   0.0  

>gi|152980347|ref|YP_001351871.1| homoserine O-acetyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 385

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/372 (81%), Positives = 332/372 (89%)

Query: 2   SIGIVSPQVMQFAEPLPLQSGASLAHYSLTYETYGSLNADKSNAVLVCHALNASHHVAGV 61
           SIGIVSPQ M F  PLPLQSGA +  Y+L YETYG+LNAD SNAVLVCHALNASHHVAG 
Sbjct: 3   SIGIVSPQSMFFDTPLPLQSGAQITDYTLVYETYGTLNADHSNAVLVCHALNASHHVAGT 62

Query: 62  YADDPDNVGWWDNMVGPGKSLDTDRFFVIGVNNLGSCFGSTGPMHPNPATGQPYGADFPV 121
           Y++D    GWWDNMVGPGK LDT+++FVIGVNNLGSCFGSTGPMH NPATG+ YGA FPV
Sbjct: 63  YSEDAGTTGWWDNMVGPGKPLDTNKYFVIGVNNLGSCFGSTGPMHINPATGKQYGAHFPV 122

Query: 122 VTVEDWVNAQARLADRLGIDCFAAIMGGSLGGMQALAWSMMYPDRLRHCLVIASTPKLSA 181
           VTVEDWV +QARLAD LGI  FAA+MGGSLGGMQALAWS+++P+RLRHC+VIASTPKL+A
Sbjct: 123 VTVEDWVQSQARLADALGIKQFAAVMGGSLGGMQALAWSILFPERLRHCVVIASTPKLTA 182

Query: 182 QNIAFNDVARQAILTDPQYHGGDFYAHGVVPKNGLRVARMVGHITYLSDDDMAEKFGRDL 241
           QNIAF+DVARQAILTDP YHGGDFYAHGVVPKNGLRVARM+GHITYLSDDDMA KFGR+L
Sbjct: 183 QNIAFDDVARQAILTDPDYHGGDFYAHGVVPKNGLRVARMLGHITYLSDDDMAAKFGREL 242

Query: 242 RSGQYQFGYGVDFEIESYLRYQGDKFSTYFDANTYLLITKALDYFDPAREFGGDLAKAFA 301
           RSG YQFG+G+DFEIESYLRYQGDKFSTYFDANTYLLITKALDYFDPA++FGGDL K  +
Sbjct: 243 RSGSYQFGFGIDFEIESYLRYQGDKFSTYFDANTYLLITKALDYFDPAKDFGGDLTKTLS 302

Query: 302 RTRAKFLLVSFTTDWRFSPERSREMVQALVANKRRVSYAEIDAPHGHDAFLLDDARYMKV 361
            TRAKFLLVSFTTDWRFSPERS EMVQALV N R V+YAEIDAPHGHDAFLLDD RYM V
Sbjct: 303 NTRAKFLLVSFTTDWRFSPERSHEMVQALVNNNRTVTYAEIDAPHGHDAFLLDDQRYMNV 362

Query: 362 VREYYASIWNEL 373
           VR Y+   + E+
Sbjct: 363 VRSYFERAYEEI 374


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.137    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 985,982
Number of extensions: 44381
Number of successful extensions: 95
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 95
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 294
Effective length of database: 906,776
Effective search space: 266592144
Effective search space used: 266592144
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)