BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0046.p (418 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152982482|ref|YP_001352263.1| major facilitator transporter [... 465 e-132 gi|152982828|ref|YP_001354323.1| major facilitator transporter [... 188 4e-49 gi|152982528|ref|YP_001352447.1| major facilitator transporter [... 184 7e-48 gi|152980079|ref|YP_001353290.1| major facilitator transporter [... 170 1e-43 gi|152981729|ref|YP_001352561.1| major facilitator transporter [... 62 6e-11 >gi|152982482|ref|YP_001352263.1| major facilitator transporter [Janthinobacterium sp. Marseille] Length = 403 Score = 465 bits (1197), Expect = e-132, Method: Compositional matrix adjust. Identities = 285/399 (71%), Positives = 336/399 (84%), Gaps = 1/399 (0%) Query: 19 ATHAASHSHGLSTGLIGLLASGAGLAVASLYYSQPMLGVLADDIGASERAVGMVPMSTQL 78 +TH + + L LI LLA+GAGL+VASLYYSQPMLGVL DI AS+R +G+VP TQL Sbjct: 6 STHTQAEAPALPASLILLLATGAGLSVASLYYSQPMLGVLGADIHASDRMIGLVPTLTQL 65 Query: 79 GYALGILLLAPLGDRYDRRRIILIKAAILTVALLLAGAASGVSTLLAASLAIGLTATLAQ 138 GYALGILLLAPLGDRYDRR IIL+KAA+L +ALL +G A G+S LL +SL IGLTAT+AQ Sbjct: 66 GYALGILLLAPLGDRYDRRSIILVKAALLALALLFSGLAPGISWLLLSSLVIGLTATMAQ 125 Query: 139 DIVPAAATLAPEQHRGRIVGTVMTGLLLGILLSRVVSGFVAEHFGWRAMFVGASASIALI 198 DIVPAAATLAPE HRG+IVGTVMTGLLLGILLSRV+SGF AE FGWR++++ AS +A+I Sbjct: 126 DIVPAAATLAPESHRGKIVGTVMTGLLLGILLSRVISGFGAEAFGWRSVYIAASVGVAMI 185 Query: 199 GLAAWRGLPRFHPTTHLSYGALLGSLGSLVKKHGALRRAALAQGLLSVGFSAFWSTLAVM 258 +A WRGLPRF PTT L+YG LLGS+ L ++HGALR+AALAQGLL++GFSAFWSTLAVM Sbjct: 186 AVATWRGLPRFQPTTQLAYGQLLGSMVQLWRRHGALRQAALAQGLLALGFSAFWSTLAVM 245 Query: 259 LHGAPFHLGSAAAGAFGLAGAAGALAAPLAGRISDKKGPELVTRLGVSLAALSFASMALS 318 LHGAPFHLGSAAAG+FGLAGAAGALAAPLAG+++DK+GPELVTRLG LAA+SFA M L+ Sbjct: 246 LHGAPFHLGSAAAGSFGLAGAAGALAAPLAGKLADKRGPELVTRLGAGLAAVSFAVMLLA 305 Query: 319 PWFSTQGQLVLLALAAIGFDLGVQATLVAHQTIVYSIEPGARSRLNAVLFVGMFIGMAAG 378 P QL LL A +GFDLGVQATL+AHQTIVY I+PGARSRLNA+LF GMFIGMA+G Sbjct: 306 PMLPVHLQLALLVAATVGFDLGVQATLIAHQTIVYGIDPGARSRLNALLFTGMFIGMASG 365 Query: 379 AALGSLALAQWGWIAVVGLAVISAVLALVVRLWPGAAKA 417 AALGSL L+Q+GW VV LA ++++ L VR + GA+KA Sbjct: 366 AALGSLLLSQFGWAGVVVLATVASLATLAVR-FAGASKA 403 >gi|152982828|ref|YP_001354323.1| major facilitator transporter [Janthinobacterium sp. Marseille] Length = 407 Score = 188 bits (478), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 141/408 (34%), Positives = 213/408 (52%), Gaps = 11/408 (2%) Query: 4 LQKPHPASTAAAPAAATHAASHSHGLSTGLIGLLASGAGLAVASLYYSQPMLGVLADDIG 63 + P P S A P A L+T + L+A +GL Y++QP+L +A + Sbjct: 1 MSTPDPHSPVAVPVAPPKY------LATSALLLMALASGLCAGGNYFNQPLLRSIALSLN 54 Query: 64 ASERAVGMVPMSTQLGYALGILLLAPLGDRYDRRRIILIKAAILTVALLLAGAASGVSTL 123 SE + Q+ YA G++LL PLGD+ +RR + + + ++G A ++ L Sbjct: 55 VSETTAALTVTMAQVSYAFGLVLLVPLGDKLERRGLAVTLMLLAAAGQFISGFAFNITML 114 Query: 124 LAASLAIGLTATLAQDIVPAAATLAPEQHRGRIVGTVMTGLLLGILLSRVVSGFVAEHFG 183 + GL + AQ +VP AATL+ GR VG VM+GLL+GIL +R V+G ++E G Sbjct: 115 STGIIMAGLFSVAAQIMVPMAATLSDPARSGRAVGLVMSGLLIGILTARSVAGLLSELGG 174 Query: 184 WRAMFVGASASIALIGLAAWRGLPRFHPTTHLSYGALLGSLGSLVKKHGALRRAALAQGL 243 W ++ A + L+ LA W LP +SY +L S+ +L+ ++ LR +L L Sbjct: 175 WTTVYRVAGVIMLLVALALWYLLPPSRNPAQVSYLQVLRSMTALIGRYPRLRSRSLMGAL 234 Query: 244 LSVGFSAFWSTLAVMLHGAPFHLGSAAAGAFGLAGAAGALAAPLAGRISDKKGPELVTRL 303 S +ST+A++L G L A+ G GL G AGAL A +AGR++D KG VT + Sbjct: 235 TFASVSVLFSTMALLLSGPNHGLSDASIGLVGLVGIAGALMASVAGRMAD-KGMGHVTSI 293 Query: 304 GVSLAALSFASMALSPWFSTQGQLVLLALAAIGFDLGVQATLVAHQTIVYSIEPGARSRL 363 G L +A + ++ L+ + + DL +Q + +Q +V +EP ARSRL Sbjct: 294 G----CLFLLLLAWACFWLGSTSLIWFLVGMLIIDLALQGLHITNQNVVLQLEPQARSRL 349 Query: 364 NAVLFVGMFIGMAAGAALGSLALAQWGWIAVVGLAVISAVLALVVRLW 411 NAV FIG A+G+ALGSLA GW A+ V+ +LA V L+ Sbjct: 350 NAVYMTSYFIGAASGSALGSLAWRLGGWHAICVAGVLLTLLAGTVYLY 397 >gi|152982528|ref|YP_001352447.1| major facilitator transporter [Janthinobacterium sp. Marseille] Length = 403 Score = 184 bits (468), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 138/391 (35%), Positives = 211/391 (53%), Gaps = 11/391 (2%) Query: 1 MNSLQKPHPASTAAAPAAATHAASHSHGLSTGLIGLLASGAGLAVASLYYSQPMLGVLAD 60 MN L K P A P A L + L LLA GL A++YY+QP++ +++ Sbjct: 1 MNMLTKTIP---GAVPVTA-------QALPSWLTFLLALSCGLIAANVYYAQPLIRLISV 50 Query: 61 DIGASERAVGMVPMSTQLGYALGILLLAPLGDRYDRRRIILIKAAILTVALLLAGAASGV 120 D+G S +A G++ TQLGY G++ + PL D + +R+ + A+ +AL+ A A+ Sbjct: 51 DLGLSLQAAGLIVTLTQLGYITGLIFVVPLADLIETKRLTVSVMALSILALIGAALATKA 110 Query: 121 STLLAASLAIGLTATLAQDIVPAAATLAPEQHRGRIVGTVMTGLLLGILLSRVVSGFVAE 180 L A + +GL + +VP AA L PE RGR VG +M+G++LGI+L+R +S +A+ Sbjct: 111 EAFLLACMFLGLGSVTVPILVPHAAHLVPEAVRGRTVGNLMSGMMLGIMLARPISSLIAD 170 Query: 181 HFGWRAMFVGASASIALIGLAAWRGLPRFHPTTHLSYGALLGSLGSLVKKHGALRRAALA 240 H W +F+ ++A + L+ ++ LP P SYG LLGS+ +L ++ LRR A+ Sbjct: 171 HSSWHTVFIVSAAVMTLLAISLHFALPTRKPQGKFSYGHLLGSMITLARQTPVLRRRAIY 230 Query: 241 QGLLSVGFSAFWSTLAVMLHGAPFHLGSAAAGAFGLAGAAGALAAPLAGRISDKKGPELV 300 F FW+ ++L G FHL F LAG AGA+AAP+AGR SD+ Sbjct: 231 HFFQFAAFILFWTVTPLLLTGPVFHLSQTGVALFALAGVAGAIAAPIAGRASDRGWTRPA 290 Query: 301 TRLGVSLAALSFASMALSPWFSTQGQLVLLALAAIGFDLGVQATLVAHQTIVYSIEPGAR 360 T LG+ A++F ++ S L LL AAI D G ATLV Q +++ + R Sbjct: 291 TALGMLAVAIAFLITHIAEPGSPLA-LGLLVTAAILLDFGATATLVLGQRVIFGLGGEIR 349 Query: 361 SRLNAVLFVGMFIGMAAGAALGSLALAQWGW 391 R++ V + + G A G+++G+ A A GW Sbjct: 350 GRVSGVYMIIWYFGGALGSSVGAWAYAHGGW 380 >gi|152980079|ref|YP_001353290.1| major facilitator transporter [Janthinobacterium sp. Marseille] Length = 412 Score = 170 bits (431), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 138/384 (35%), Positives = 217/384 (56%), Gaps = 21/384 (5%) Query: 33 LIGLLASGAGLAVASLYYSQPMLGVLADDIGASERAVGMVPMSTQLGYALGILLLAPLGD 92 L+ L A GL+VA++YY+QP+L LA D G + +G+V TQLG A+ +LLL PLGD Sbjct: 27 LVWLFAVACGLSVANVYYAQPLLDALAADFGLATGVIGIVVTMTQLGSAIALLLLVPLGD 86 Query: 93 RYDRRRIILIKAAILTVALLLAGAASGVSTLLAASLAIGLTAT-LAQDIVPAAATLAPEQ 151 +RRR++L + L +AL+L AA+ + LL L +G+ T + Q ++ AAT+A Sbjct: 87 MLNRRRLLLAQLWSLALALVLVAAAATPAYLLVGMLFVGMLGTAMTQGLIAYAATIAALT 146 Query: 152 HRGRIVGTVMTGLLLGILLSRVVSGFVAEHFGWRAMFVGASASIALIGLAAWRGLPRFHP 211 RGR+VGT G+L+G+L +RV++G +A+ WR +++ ++ + ++ L R LP P Sbjct: 147 ERGRVVGTTQAGVLVGLLSARVLAGAIADISSWRMVYLVSAGMMLMLALLLVRVLP--QP 204 Query: 212 TTH---LSYGALLGSLGSLVKKHGALRRAALAQGLLSVGFSAFWSTLAVMLHGAPFHLGS 268 +H LSY LL S+G L+ + L+ + L+ S FWS L + L AP++ Sbjct: 205 NSHSSGLSYLQLLASMGRLMWRERVLQVRGVIAMLMFAALSIFWSALVLPLSAAPYNYSK 264 Query: 269 AAAGAFGLAGAAGALAAPLAGRISDKKGPELVTRLGVSLAALSFASMALSPWFSTQGQLV 328 A GA GL G GALAA GR +D+ + + + L +S+ +AL Q + Sbjct: 265 TAIGALGLIGVLGALAASRTGRWADQGWGQRTSAAALILLVVSWLPLAL-----MQHGWI 319 Query: 329 LLALAAIGFDLGVQATLVAHQTIVYSIEPGARSRLNAVLFVGMF-IGMAAGAALGSL--- 384 L + I DL QA V +Q+++++++ G+ SRL VG + + AAG+ LG++ Sbjct: 320 FLVVGIIALDLAGQAIHVTNQSMIFNVQEGSSSRL-----VGCYMLFYAAGSGLGAIAAT 374 Query: 385 -ALAQWGWIAVVGLAVISAVLALV 407 A A GW AV L + + LAL+ Sbjct: 375 NAFAYGGWSAVCILGAVVSGLALL 398 >gi|152981729|ref|YP_001352561.1| major facilitator transporter [Janthinobacterium sp. Marseille] Length = 402 Score = 62.0 bits (149), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 93/373 (24%), Positives = 152/373 (40%), Gaps = 29/373 (7%) Query: 47 SLYYSQPMLGVLADDIGASERAVGMVPMSTQLGYALGILLLAPLGDRYDRRRIILIKAAI 106 SL + P+L LA + S V V + + Y + L P+GDR+ + ++ Sbjct: 32 SLRVTDPLLPRLAQEFSISLGNVSYVITAFSIAYGISQLFFGPVGDRFGKYFVVACACVA 91 Query: 107 LTVALLLAGAASGVSTLLAASLAIGLTATLAQDIVPAA----ATLAPEQHRGRIVGTVMT 162 + LL A LL A L G TA I+P + + P R ++ + Sbjct: 92 CALTSLLCALAPSYPLLLVARLMAGATAA---AIIPLSMAWIGDVVPYDERQPVLAQFLI 148 Query: 163 GLLLGILLSRVVSGFVAEHFGWRAMFVGASASIALIGLAAW---RGLPRFHPTTHLSYGA 219 G ++GI + G A++F WR F G S+ LI + + R LP + T H + GA Sbjct: 149 GQIVGISAGVLFGGLAADYFSWRVPFFGISSCFVLISITLFSFNRRLPAYALTKHKAEGA 208 Query: 220 ----LLGSLGSLVKKHGALRRAALAQGLLSVGF--SAFWSTLAVMLHGAPFHLGSAAAGA 273 ++ ++ A R L L GF AF + +A LH + AA Sbjct: 209 VIRRMINEFAQVLSTPWA--RVVLFTVFLEGGFLYGAF-AFIATHLHHVHHLSLTNAASL 265 Query: 274 FGLAGAAGALAAPLAGRISDKKGPELVTRLGVSLAALSFASMALSP--WFSTQGQLVLLA 331 L G G L A + R+ G + + R G + A SF ++ L+P W++ G Sbjct: 266 VMLFGLGGLLYAGTSRRLVRDLGEKGLARWGCVVIAASFLTIGLAPSWWWAIPGCFA--- 322 Query: 332 LAAIGFDLGVQATLVAHQTIVYSIEPGARSRLNAVLFVGMFIGMAAGAALGSLALAQWGW 391 A +GF + + TL + T + P R + ++G + G + L + G Sbjct: 323 -AGLGFYM-LHNTLQINAT---QMAPERRGAAVSTFAACFYMGQSVGVGIAGLMVGFIGT 377 Query: 392 IAVVGLAVISAVL 404 V+ + I +L Sbjct: 378 TTVICIGAIGVLL 390 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.323 0.135 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 530,842 Number of extensions: 14643 Number of successful extensions: 151 Number of sequences better than 1.0e-08: 11 Number of HSP's gapped: 151 Number of HSP's successfully gapped: 11 Length of query: 418 Length of database: 1,221,021 Length adjustment: 86 Effective length of query: 332 Effective length of database: 903,079 Effective search space: 299822228 Effective search space used: 299822228 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 131 (55.1 bits)