BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4626.p
         (141 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095596|ref|YP_001100671.1| hypothetical protein HEAR2419 [...    59   8e-11

>gi|134095596|ref|YP_001100671.1| hypothetical protein HEAR2419
          [Herminiimonas arsenicoxydans]
          Length = 116

 Score = 58.9 bits (141), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%)

Query: 23 ILAASRQRNPQQGITGVLCYSDTIFVQVLEGGRDQVNRLYGRLLRDERHQDVILLAYESI 82
          IL +S++ N   G+TG+L +   +F+QVLEG   Q+ R Y  +L D RH D  ++   + 
Sbjct: 4  ILESSKKNNQALGLTGILVHGGGMFMQVLEGPDHQIFRKYSEILDDRRHADCRIVLITTT 63

Query: 83 DERLYSSWTMGKIRL 97
          +ER +  W M  + +
Sbjct: 64 EERAFPDWAMAVLEI 78


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.321    0.134    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 228,621
Number of extensions: 7923
Number of successful extensions: 21
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 1,000,347
Length adjustment: 73
Effective length of query: 68
Effective length of database: 759,812
Effective search space: 51667216
Effective search space used: 51667216
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 124 (52.4 bits)