BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4503.p
         (216 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095011|ref|YP_001100086.1| acetyl-CoA:acetoacetyl-CoA tran...   353   3e-99

>gi|134095011|ref|YP_001100086.1| acetyl-CoA:acetoacetyl-CoA
           transferase subunit beta [Herminiimonas arsenicoxydans]
          Length = 210

 Score =  353 bits (906), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 172/207 (83%), Positives = 191/207 (92%)

Query: 8   MAARAAKELQDGFYVNLGIGLPTLVANHVPSDIEVWLQSENGLLGIGPFPTEDQVDPDLI 67
           MAARAA+EL DG YVNLGIGLPTLVAN +P+DI +WLQSENGLLGIGPFPTED+VDPDLI
Sbjct: 1   MAARAAQELHDGAYVNLGIGLPTLVANFIPADIHIWLQSENGLLGIGPFPTEDEVDPDLI 60

Query: 68  NAGKQTVTTIPGSSFFSSADSFGMIRGGKINIAILGAMQVSAKGDLANWMIPGKMVKGMG 127
           NAGKQTVT +PG+S+FSSADSFGMIRGGKI+IA+LGAMQVS +GDLANWMIPGKMVKGMG
Sbjct: 61  NAGKQTVTALPGASYFSSADSFGMIRGGKIDIALLGAMQVSERGDLANWMIPGKMVKGMG 120

Query: 128 GAMDLVAGVGRVVVLMEHVAKAKDGSTSKKILNDCNLPLTGVGVVNRIITDLGVIDVTPG 187
           GAMDLVAGV R+VVLMEHVA+AKDGS S KIL+ C+LPLTGVGVV+RIITDLGVID+TP 
Sbjct: 121 GAMDLVAGVKRIVVLMEHVARAKDGSISHKILSSCDLPLTGVGVVDRIITDLGVIDITPK 180

Query: 188 GLKLIELAAGVTKEEVIEKTEAPLDVS 214
           GL+LIELA GVTKEEV+  T  PLDVS
Sbjct: 181 GLRLIELAPGVTKEEVVANTGVPLDVS 207


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.316    0.136    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 431,635
Number of extensions: 17984
Number of successful extensions: 60
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 60
Number of HSP's successfully gapped: 1
Length of query: 216
Length of database: 1,000,347
Length adjustment: 78
Effective length of query: 138
Effective length of database: 743,337
Effective search space: 102580506
Effective search space used: 102580506
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 127 (53.5 bits)