BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4473.p
         (216 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096103|ref|YP_001101178.1| glutathione S-transferase [Herm...    60   7e-11

>gi|134096103|ref|YP_001101178.1| glutathione S-transferase
           [Herminiimonas arsenicoxydans]
          Length = 237

 Score = 60.5 bits (145), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 8/203 (3%)

Query: 10  LQLYVDAQYASPYAMSVCVALREKQLPFELHTVDLDAA--AQHAAPYVALSLTARVPTLV 67
           L+L +  +  S ++M   VA+    +PF+  ++ LD A  A   A Y   S   RVP L+
Sbjct: 22  LKLVIANKNYSSWSMRPWVAMTAFNIPFQEVSLLLDRADTAMQIAHY---SSAGRVPILL 78

Query: 68  HGSLALSESSAITEYLEECFTGPPLYPQHPAQRARARQVQAWLRSDLMAIREE--RNTQV 125
            G   + +S AI EYL E F    ++P+  A RA AR + A + S    +R     N + 
Sbjct: 79  AGETTIWDSLAICEYLAEQFPEKKMWPEDVAARALARSICAEMHSGFTGVRSAMWMNIRA 138

Query: 126 LFYGARKAPLTAAALAATQRLFRFAEALLAPGATCLFDQWCIADTDLALMLNRLALHGDP 185
            F G  +     A +     ++    AL  P +  LF ++ IAD   A ++ R   +   
Sbjct: 139 RFPGKGRTIDAQADIGRISEIWETCLALSGP-SEFLFGEFSIADAYFAPVVMRFRTYDVV 197

Query: 186 VPERLAVYAQAQWQRPTVQAWVA 208
           +   L  Y +     P V  W++
Sbjct: 198 LGPALDAYVERVAAHPAVAQWIS 220


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.322    0.131    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 344,422
Number of extensions: 10760
Number of successful extensions: 37
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 1
Length of query: 216
Length of database: 1,000,347
Length adjustment: 78
Effective length of query: 138
Effective length of database: 743,337
Effective search space: 102580506
Effective search space used: 102580506
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 127 (53.5 bits)