BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4438.p
         (768 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095321|ref|YP_001100396.1| 5-methyltetrahydropteroyltriglu...   856   0.0  

>gi|134095321|ref|YP_001100396.1|
           5-methyltetrahydropteroyltriglutamate--homocysteine
           S-methyltransferase [Herminiimonas arsenicoxydans]
          Length = 773

 Score =  856 bits (2211), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/763 (56%), Positives = 538/763 (70%), Gaps = 18/763 (2%)

Query: 5   HNLGFPRIGARRELKFALESYWKGESSLAALEETGAQLRRRHW--QDQAALDLVPVGDFS 62
           H LGFPRIGA+RELKFA+ES+W+G+S LAAL++TG  LR+RHW  Q  A LD V VGDF+
Sbjct: 8   HILGFPRIGAQRELKFAVESFWRGDSDLAALQQTGKTLRQRHWAIQADAGLDFVSVGDFA 67

Query: 63  FYDQVLDMSVTLGNLPARVQ-DFHGHALDNYFRVARGRSAPHAHDSCCAGVAAGEMTKWF 121
           +YDQVL+    LG +P R + D     L +YF +ARG     A           EMTKWF
Sbjct: 68  WYDQVLNTLALLGAVPTRFKFDPKKLTLADYFTLARGNPEHFAM----------EMTKWF 117

Query: 122 DTNYHYIVPEFHATTRFTLDASRLLAQVRQAQEQGVQAKPVIIGPVTYLALGKAKDGS-- 179
           DTNYHY+VPEF A  RF      L  +  +A   G + K  ++GP+T L LGK K G   
Sbjct: 118 DTNYHYLVPEFTADLRFDGGVDWLFEENAEAVALGHKTKVTLVGPLTLLYLGKIKSGEGD 177

Query: 180 ---DKLALLERLLPVYSQLLDTLAAAGVQWVQIDEPILVTELDADWQHALNHAYHHLKVC 236
              DKL LL +++  Y  +L  L AAGV+WVQIDEPIL  EL A W++A    Y  L   
Sbjct: 178 HKFDKLDLLPKVIAAYQNVLQRLQAAGVEWVQIDEPILALELAAVWRNAFVPTYEALSAA 237

Query: 237 KVKLLLATYFGQLQENGYLAANLPVAGLHVDAIQGREEVTGLLNILPPHKVLSLGVINGR 296
             KLLLATYF Q++E+  L  +LPVAG+H+D ++G  ++   L   P  +VLS G+++GR
Sbjct: 238 APKLLLATYFDQVREHTALLHSLPVAGVHLDLVRGAGQLDDFLQDWPQGRVLSAGIVDGR 297

Query: 297 NIWKTDLSALLDWLEPLAQRLGERLWIAPSCSLLHVPVDLAQEEKLDQDIQSWLAFAVQK 356
           NIW+ DL A L  L+PL ++LG++LW++ SCSLLHVPVDLA E KLD++++ WL+FA QK
Sbjct: 298 NIWRADLDAALTALKPLQEKLGDKLWVSASCSLLHVPVDLAHENKLDEELKGWLSFATQK 357

Query: 357 LDELQLIGRALREGRAAVQDALHANAAALAARRTSPRVHNPAVRAALAQLTPQHGQRNSH 416
             E+  I RAL   R AV     A A ++AAR TSPR+HNP V+  L++++     R++ 
Sbjct: 358 TQEITAIKRALNGERDAVAAQFEAAALSVAARNTSPRIHNPLVQKRLSEISKISAARSNV 417

Query: 417 YPERASKQAALLQLPLYPTTTIGSFPQTAEIRQARSHYKAGQLDEAAYRTVMRAEIERSV 476
           + +R  KQ A  +LP +PTT IGSFPQT +IRQAR+ YK G++    Y   MR E+   V
Sbjct: 418 FADRIVKQQARFKLPAFPTTNIGSFPQTTDIRQARAQYKRGEIGHLDYLNRMRDEVRLVV 477

Query: 477 REQEALGLDVLVHGEAERNDMVEYFGEQLQGYAFSQFGWVQSYGSRCVKPPILFGDISRP 536
           ++QE +GLDV VHGE ERNDMVEYFGEQL GY F+  GWVQSYGSRCVKPP ++GD+ RP
Sbjct: 478 QKQEEIGLDVFVHGEPERNDMVEYFGEQLWGYGFTANGWVQSYGSRCVKPPFIYGDVYRP 537

Query: 537 QAMTVEWITHAQSLTSKPMKGMLTGPVTLLNWSFVRDDQPRADSCRQLALAIRQEVLDLE 596
           +AMTV W   AQSLTSKPMKGMLTGPVT+L WSFVRDDQPR  +  Q+ALA+R EV+DLE
Sbjct: 538 EAMTVGWSEFAQSLTSKPMKGMLTGPVTMLQWSFVRDDQPRDTTALQIALALRDEVVDLE 597

Query: 597 AAGVRVIQIDEAALREGLPLRRAQWQHYLNWAVQAFRITANGVADTTQIHTHMCYSEFND 656
            AG+ +IQIDE A REGLPL+ A W HYL+WAV+AFRI+A+GV D TQIHTHMCYSEFND
Sbjct: 598 KAGIGMIQIDEPAFREGLPLKAADWPHYLDWAVKAFRISASGVQDDTQIHTHMCYSEFND 657

Query: 657 IIASIADMDADVITIETSRSDMELLDAFDHFNYPNEIGPGVYDIHSPNIPTQEHMVQLMQ 716
           I+  IA MDADVITIETSRSDMELLD F  F YPN+IGPGVYDIHSP +P  E M +L++
Sbjct: 658 ILPWIAAMDADVITIETSRSDMELLDGFGEFAYPNDIGPGVYDIHSPRVPRVEEMQRLLR 717

Query: 717 KATERIDARRLWVNPDCGLKTRQWAEVIPALRNMVAAAQTLRA 759
           KA   I   +LWVNPDCGLKTR W E   AL NMV AA++LRA
Sbjct: 718 KARGVIPDAQLWVNPDCGLKTRGWPETTLALENMVLAARSLRA 760


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.321    0.134    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 1,437,567
Number of extensions: 57742
Number of successful extensions: 179
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 174
Number of HSP's successfully gapped: 1
Length of query: 768
Length of database: 1,000,347
Length adjustment: 89
Effective length of query: 679
Effective length of database: 707,092
Effective search space: 480115468
Effective search space used: 480115468
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 132 (55.5 bits)