BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4432.p
         (154 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096417|ref|YP_001101492.1| hypothetical protein HEAR3264 [...    65   2e-12

>gi|134096417|ref|YP_001101492.1| hypothetical protein HEAR3264
           [Herminiimonas arsenicoxydans]
          Length = 178

 Score = 64.7 bits (156), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 3/79 (3%)

Query: 41  LFIPGIPTTEFVLLSAWAASRGSPRLQRWLEQHRLFGPMIHNWRHGQVVARRAKISA--S 98
           +F+PG+PTT FVLL+A   ++ SPR+ RW+ QHRL GP++ NW   + + R  K  A  +
Sbjct: 69  IFLPGLPTTPFVLLAAACFAKASPRVHRWMLQHRLLGPVLRNWERHRSLTRGTKYVAVGT 128

Query: 99  LMMSLCLVIMLFTVKRHWV 117
           +M+++   +  F+  R WV
Sbjct: 129 MMLTISFSVWAFS-DRPWV 146


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.325    0.136    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 288,043
Number of extensions: 10271
Number of successful extensions: 66
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 66
Number of HSP's successfully gapped: 1
Length of query: 154
Length of database: 1,000,347
Length adjustment: 74
Effective length of query: 80
Effective length of database: 756,517
Effective search space: 60521360
Effective search space used: 60521360
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 125 (52.8 bits)