BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4364.p
         (182 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095772|ref|YP_001100847.1| putative monooxygenase oxidored...   120   3e-29

>gi|134095772|ref|YP_001100847.1| putative monooxygenase
           oxidoreductase [Herminiimonas arsenicoxydans]
          Length = 168

 Score =  120 bits (302), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 86/151 (56%), Gaps = 1/151 (0%)

Query: 27  RTLRNLMGAYPTGVAIVTMRTASGRPVGLTINSFASLSLDPPLVLWSLVNHSPNLEAFRD 86
           R  R+ +  + TGV I+T R      +GLT +SF S+SL+PPLVLWSL   + +L  F  
Sbjct: 15  RHFRDALSQFATGVTIITTRLEDDTFLGLTASSFNSVSLNPPLVLWSLAQTANSLPVFTG 74

Query: 87  CSHFAINVLADGQEELARRFASPAIVDKFEGVSLAHAPEGLPVVEDALTVLVCEHDHCRT 146
            SH+ IN+LA  Q ELA RFA P+  ++F GV    +P GLP++        C +     
Sbjct: 75  NSHYVINILAADQAELANRFARPS-KNRFAGVDFTLSPTGLPILSGVAAWFECHNRSRYP 133

Query: 147 VGDHLLMVGRIVRTNHQPAAPLVFHAGRFTA 177
            GDH++ VG +   +  P  PLVFH GRF A
Sbjct: 134 EGDHVIFVGEVESCDVSPQEPLVFHGGRFMA 164


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.321    0.134    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 321,133
Number of extensions: 12633
Number of successful extensions: 32
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 1,000,347
Length adjustment: 76
Effective length of query: 106
Effective length of database: 749,927
Effective search space: 79492262
Effective search space used: 79492262
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 126 (53.1 bits)