BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4279.p
         (605 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096352|ref|YP_001101427.1| glucosamine--fructose-6-phospha...  1059   0.0  
gi|134094457|ref|YP_001099532.1| amidophosphoribosyltransferase ...    72   8e-14

>gi|134096352|ref|YP_001101427.1| glucosamine--fructose-6-phosphate
           aminotransferase [Herminiimonas arsenicoxydans]
          Length = 605

 Score = 1059 bits (2738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/605 (82%), Positives = 558/605 (92%)

Query: 1   MCGIVGAVAQQNVTPILLEGLKRLEYRGYDSCGVALHVDGKLQRSRSTSRVADLQQQVAQ 60
           MCGIVGAVAQ+N+TPILLEGLKRLEYRGYDSCG+ALHVDG+L+R+RST RV +L++Q+A 
Sbjct: 1   MCGIVGAVAQRNITPILLEGLKRLEYRGYDSCGIALHVDGELKRARSTERVTELERQIAS 60

Query: 61  TGLSGFTGIAHTRWATHGAPATHNAHPHFSRERIALVHNGIIENHDELRAELQAAGYVFE 120
           T LSGFTGIAHTRWATHGAPA+HNAHPHFSR+RIALVHNGIIENHDELR EL+A GYVFE
Sbjct: 61  TQLSGFTGIAHTRWATHGAPASHNAHPHFSRDRIALVHNGIIENHDELRDELKALGYVFE 120

Query: 121 SQTDTEVIAHLIDHMYDGDLFHTVQQAVRRLTGAYAIAVFCADEPHRVVAARQGSPLIVG 180
           SQTDTEVIAHL+DH+Y GDLF TVQ A +RLTGA+AIAVF  DEPHRVV AR+GSPLIVG
Sbjct: 121 SQTDTEVIAHLVDHLYTGDLFETVQLAAKRLTGAFAIAVFSRDEPHRVVGARRGSPLIVG 180

Query: 181 VGEGQNFVASDAMALAGTTDQIIYLEEGDVVDLQIQKVWIVDAAGKPAVREVRTVQAYTS 240
           +G G+NFVASDA+ALAGTTDQIIYLEEGDVVDLQ+Q+VWIVDA GK   REV+TV A+T 
Sbjct: 181 IGNGENFVASDALALAGTTDQIIYLEEGDVVDLQLQRVWIVDADGKQVQREVKTVHAHTG 240

Query: 241 AVELGPYQHYMQKEIFEQPRAIADTLEGVVGIMPELFGDKAYKVFKGIDSILILACGTSY 300
           AVELGPY+HYMQKEIFEQPRAIADTLEG+  I P++FGD+A+  F+ IDS+LILACGTSY
Sbjct: 241 AVELGPYRHYMQKEIFEQPRAIADTLEGISAITPDIFGDQAFATFRKIDSVLILACGTSY 300

Query: 301 YAGLTAKYWLESIARIPVNVEIASEYRYRDSVPNPKSLVVTISQSGETADTLAALKHARS 360
           Y+G+TAKYW+E IA +  +VEIASEYRYRDSVPNP +LVVTISQSGETADTLAAL+HA+S
Sbjct: 301 YSGMTAKYWIEGIAGVRCDVEIASEYRYRDSVPNPHALVVTISQSGETADTLAALRHAQS 360

Query: 361 LGMLHTLTICNVATSAMVRECELAYITRAGVEVGVASTKAFTTQLTALFLLTLVLAQSRG 420
            GMLHTLTICN ATSAMVREC LAYITRAGVEVGVASTKAFTTQL ALFLLTL LAQ +G
Sbjct: 361 HGMLHTLTICNAATSAMVRECALAYITRAGVEVGVASTKAFTTQLAALFLLTLSLAQVKG 420

Query: 421 LLTEEQEAEHLKAMRHLPAALQGVLALEPSIVAWAEAFARRENALFLGRGLHYPIALEGA 480
            L +EQEA +LK MRHLP A+  VLALEP I+AWAEAFAR+ENALFLGRGLHYPIALEGA
Sbjct: 421 RLNDEQEAAYLKQMRHLPVAISAVLALEPQIIAWAEAFARKENALFLGRGLHYPIALEGA 480

Query: 481 LKLKEITYIHAEAYAAGELKHGPLALVTEQMPVVTIAPNDALVEKLKSNMQEVRARGGQL 540
           LKLKEI+YIHAEAY AGELKHGPLALVTE+MPVVT+APND+++EKLKSNMQEVRARGG+L
Sbjct: 481 LKLKEISYIHAEAYPAGELKHGPLALVTEEMPVVTVAPNDSMIEKLKSNMQEVRARGGEL 540

Query: 541 YVFADGDSRITSAEGVHVIRMPEHYGALSPILHVVPLQLLSYHTALARGTDVDKPRNLAK 600
           YVFADGDSRITS EG+HVIR+PEHYGALSPILHVVPLQLL+YHTALARGTDVDKPRNLAK
Sbjct: 541 YVFADGDSRITSGEGLHVIRLPEHYGALSPILHVVPLQLLAYHTALARGTDVDKPRNLAK 600

Query: 601 SVTVE 605
           SVTVE
Sbjct: 601 SVTVE 605


>gi|134094457|ref|YP_001099532.1| amidophosphoribosyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 505

 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 22/217 (10%)

Query: 1   MCGIVGAVAQQNVTPILLEGLKRLEYRGYDSCGVALHVDGKLQRSRSTSRVADLQQQVAQ 60
           MCGIVG V+   V  ++ + L  L++RG D+ G+A          ++   V D+ +    
Sbjct: 1   MCGIVGVVSHNPVNQLIYDALLLLQHRGQDAAGIATDNGNTFSMHKANGLVRDVFRTRNM 60

Query: 61  TGLSGFTGIAHTRWATHGAPATHNAHPHFSRERIALV--HNGIIENHDELRAEL-QAAGY 117
             L G +G+   R+ T G+ +   A P +      ++  HNG + N ++L+ E+ +    
Sbjct: 61  RSLFGNSGVGQVRYPTAGSSSAEEAQPFYVNAPFGIIMAHNGNLTNWEQLKIEMFKNDRR 120

Query: 118 VFESQTDTEVIAHLIDHM-------YDGD---LFHTVQQAVRRLTGAYAIAVFCADEPHR 167
              + +D+EV+ +++ H        Y  D   +F  V    +R+ G+YA+    A   + 
Sbjct: 121 HINTTSDSEVLLNVLAHEIQQATTGYSLDPAAIFKAVAMVHKRVRGSYAVTAQIAG--YG 178

Query: 168 VVAARQG---SPLIVGVGEGQN----FVASDAMALAG 197
           ++A R      PL +G  E +      VAS+++AL G
Sbjct: 179 LLAFRDPFGIRPLCIGFNETEQGTEYLVASESVALEG 215


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.320    0.134    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 1,133,509
Number of extensions: 47267
Number of successful extensions: 146
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 144
Number of HSP's successfully gapped: 2
Length of query: 605
Length of database: 1,000,347
Length adjustment: 87
Effective length of query: 518
Effective length of database: 713,682
Effective search space: 369687276
Effective search space used: 369687276
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)