BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4273.p
         (396 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095425|ref|YP_001100500.1| aromatic amino acid aminotransf...   395   e-111

>gi|134095425|ref|YP_001100500.1| aromatic amino acid
           aminotransferase [Herminiimonas arsenicoxydans]
          Length = 404

 Score =  395 bits (1015), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/386 (48%), Positives = 251/386 (65%), Gaps = 2/386 (0%)

Query: 11  DPILSLMEQFQRDERSNKVNLSIGIYTDGRGVVPVLPTVRAAAAAVAEAGAPYVYLPMEG 70
           DPIL + E F  D+  NK+NL +G+Y D  G +P+L  VR A A + E  +P  YLP++G
Sbjct: 19  DPILGITEAFNADKNPNKINLGVGVYNDDNGKLPLLECVRKAEAQLMEKLSPRGYLPIDG 78

Query: 71  HAAYRQAVAKLLFGAD--LPSTEHLAIVQTLGGSGALKVGADLIARFFPQPTIWLPDPTW 128
            AAY +AV +L+FGAD  +   +     Q +GG+GALK+GAD + RF P   +W+ DP+W
Sbjct: 79  LAAYDKAVQELVFGADSSVVKDKRAVTAQAIGGTGALKLGADFLKRFAPNAQVWISDPSW 138

Query: 129 DNHVGIFEGAGFKTERYPYYDAQTKGLDFPAMLAKLDSLSKGAVVLLHPCCHNPTGVDPT 188
           +NH  +FE AGF    YPYYDA T+G++F  ML  L S+  G++VLLH CCHNPTG D  
Sbjct: 139 ENHRALFESAGFVVNNYPYYDAATRGVNFAGMLDTLKSIPSGSIVLLHACCHNPTGADLN 198

Query: 189 RAQWEEIIAVVEKRGLLPFFDLAYQGFAESLDEDIWPVREAVRRQIPFFLSNSFSKIFSL 248
            AQW E++ VV  RGL+PF D+AYQGF + ++ D   VR+      P F+SNSFSK FSL
Sbjct: 199 DAQWLEVLNVVTTRGLIPFLDMAYQGFGDGIEADGKVVRQFAEAGGPVFVSNSFSKSFSL 258

Query: 249 YSERIGALSVFCPQSGQAANVLGQLKLTVRRNYSSPARNGALLVAHVLGDDKLATQWRAE 308
           Y ER+GALS+    + +A+ VL QLK  +R NYS+P  +G  +VA  L   +L   W  E
Sbjct: 259 YGERVGALSIVSSNAEEASRVLSQLKRVIRTNYSNPPMHGGQVVATALASPELRALWEEE 318

Query: 309 VEEMRVRVRDMRVKLASQLKSAVPDQDFSFLLRQNGMFGYTGLSSAQVDRLREEFGVYAV 368
           +  MRVR+R+MR     +LK   P  +F F+ +Q GMF Y+GL+  QVDRLR+EF +YAV
Sbjct: 319 LAGMRVRIREMRQAFVQKLKEQAPAHNFDFVTKQRGMFSYSGLTKPQVDRLRDEFSIYAV 378

Query: 369 GTGRICVAGLNDSNVARVAETMAEVL 394
            TGRICVA LN  N+  V   +A+VL
Sbjct: 379 DTGRICVAALNTKNIDYVIAAIAKVL 404


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.321    0.137    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 713,275
Number of extensions: 28080
Number of successful extensions: 101
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 101
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 1,000,347
Length adjustment: 84
Effective length of query: 312
Effective length of database: 723,567
Effective search space: 225752904
Effective search space used: 225752904
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)