BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4173.p
         (156 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096523|ref|YP_001101598.1| hypothetical protein HEAR3375 [...   196   4e-52

>gi|134096523|ref|YP_001101598.1| hypothetical protein HEAR3375
           [Herminiimonas arsenicoxydans]
          Length = 157

 Score =  196 bits (498), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 99/155 (63%), Positives = 120/155 (77%), Gaps = 2/155 (1%)

Query: 1   MKFNHLIQINDPLNPLIDPLTREQLWRGLVMRAESPQLFMPHLDDCRLLEKSLDRVRREL 60
           M+F HLI+INDPLNPLID LTR QLWRGLV+RAE+P+LF+P LD+C L E+    + R L
Sbjct: 1   MQFQHLIEINDPLNPLIDTLTRAQLWRGLVLRAEAPKLFVPWLDECDLGERDGAVLPRTL 60

Query: 61  RYGELVIIDQVSYLPQIQVLYDVPAQGDIPASRMSMTIEEPQADVLFVRFEYDDGQPEDV 120
           RY  L+I D+V++ PQ  V Y+VPAQGDIPAS + +TIEEPQ   LFVRFEYD G+ +D 
Sbjct: 61  RYNALLIHDRVTFTPQETVHYEVPAQGDIPASSLLVTIEEPQPGALFVRFEYDSGKTDD- 119

Query: 121 SGEAAFYDNFRRSAYQEADIDTVRIIRELTQRGEL 155
               AFYD FRRSAYQEADIDT+RIIR+L + G L
Sbjct: 120 -DMDAFYDEFRRSAYQEADIDTIRIIRQLAEEGRL 153


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.323    0.141    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 299,876
Number of extensions: 11831
Number of successful extensions: 36
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 1,000,347
Length adjustment: 74
Effective length of query: 82
Effective length of database: 756,517
Effective search space: 62034394
Effective search space used: 62034394
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 125 (52.8 bits)