BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4151.p
         (222 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096114|ref|YP_001101189.1| hypothetical protein HEAR2956 [...   298   2e-82

>gi|134096114|ref|YP_001101189.1| hypothetical protein HEAR2956
           [Herminiimonas arsenicoxydans]
          Length = 222

 Score =  298 bits (762), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 139/221 (62%), Positives = 176/221 (79%)

Query: 1   MTTELDSSLIADYLLDHPHFFEEHAELLSTVKLTSPVMGRAVSLQERQMEILREKIRVQE 60
           MT+ LDS+ +ADYLL++PHFFEEHAE+L+ VKL+SP+ GR +SLQERQM+++REK ++ E
Sbjct: 1   MTSPLDSNAVADYLLNNPHFFEEHAEVLAQVKLSSPLGGRTLSLQERQMDVMREKFKIME 60

Query: 61  LRMAELMRIAQENDEITNKFQAWSRALLLTRDAADLPRVLVTQLQEIFHVPQVTVRLWNL 120
           LR+AEL+RI QEND+IT KF  W+R+LLL R+  DLP  L T LQ  F VP VT+RLW +
Sbjct: 61  LRLAELIRIGQENDQITRKFHTWTRSLLLARNDVDLPHTLTTGLQTTFAVPHVTLRLWGV 120

Query: 121 TDTHMDNWATQEVSEDARIFANGLSTPFCGPNKEFEAASWLDDAASVKSVAMLPLRVGAA 180
            +     W    VS D+RIF+NGL+TPFCG N +FEAASWL+DA S++S+A+LPLR+  A
Sbjct: 121 AEEFAHTWFAAPVSADSRIFSNGLTTPFCGGNNDFEAASWLEDAPSIQSLALLPLRLDDA 180

Query: 181 PEAFGLLVLGSPDPNRFTIDMGTDFLTRIGETGSAALACLL 221
           PEAFGLLVLGS DP+RFT DM TDFLT IG+T SAAL+ LL
Sbjct: 181 PEAFGLLVLGSSDPHRFTSDMATDFLTNIGQTASAALSSLL 221


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.320    0.133    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 381,121
Number of extensions: 13363
Number of successful extensions: 41
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 41
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 1,000,347
Length adjustment: 78
Effective length of query: 144
Effective length of database: 743,337
Effective search space: 107040528
Effective search space used: 107040528
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 127 (53.5 bits)