BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4146.p
         (281 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096111|ref|YP_001101186.1| putative acyltransferase [Hermi...   384   e-108
gi|134096112|ref|YP_001101187.1| lauroyl/myristoyl acyltransfera...    82   4e-17

>gi|134096111|ref|YP_001101186.1| putative acyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 290

 Score =  384 bits (987), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/277 (69%), Positives = 218/277 (78%)

Query: 1   MLVSLFRLLSFLPLPALHAIGVAVGWLVFLLSPAYRRRLTDNITLAGHRSSLLKAVGEAG 60
           MLV LFRLLS+LPLP LHA+G A GW V+L SP YRRRL +NI  AG    L  A+ E+G
Sbjct: 1   MLVLLFRLLSYLPLPILHAMGSAFGWAVYLASPTYRRRLQENIHQAGFGDHLSAAIAESG 60

Query: 61  KGMFELPFIWCANPKRVLRTARIVNWELVQQALDAKAGIVFLTPHLGCFEISAQSVARHS 120
           K + ELPF+WCA P+RVL+T +I NW++VQQA   K GI+FLTPHLGCFEISAQ+ A   
Sbjct: 61  KNVLELPFVWCAAPERVLKTVQIKNWDIVQQAHADKRGIIFLTPHLGCFEISAQAAAAQI 120

Query: 121 SLSVLYRPPRKAALKPLIEGARARANLHLAPANLAGVRILLKALKNGQAIGLLPDQVPQN 180
            L+VLYRPPR+AALKPLIE ARAR NL LAPANL+GVR L K LK   AIGLLPDQVPQN
Sbjct: 121 PLTVLYRPPRQAALKPLIEDARARHNLALAPANLSGVRTLFKVLKRSGAIGLLPDQVPQN 180

Query: 181 GEGVWADFFGKPAYTMTLPAKLQQMSGAPIILAYAERLSWGRGYAIHFVPFEGELGDTPE 240
           GEGVWADFFGKPAYTMTLPAKL++MSGA +ILA+AERL  G+GY +HF  F    G TPE
Sbjct: 181 GEGVWADFFGKPAYTMTLPAKLREMSGATMILAFAERLPRGKGYILHFQSFNMADGLTPE 240

Query: 241 QQARAINSAMEKLIARCPAQYIWSYNRYKTPRGVTPP 277
           QQ RAIN+AME+LI  CPAQY WSYN YK P GV PP
Sbjct: 241 QQVRAINAAMEQLIRMCPAQYFWSYNHYKIPAGVAPP 277


>gi|134096112|ref|YP_001101187.1| lauroyl/myristoyl acyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 292

 Score = 81.6 bits (200), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 10/259 (3%)

Query: 20  IGVAVGWLVFLLSPAYRRRLTDNITLA------GHRSSLLKA-VGEAGKGMFELPFIWCA 72
           +G  +G L+F+   + RR    N+ L         R ++ K       + + E   +W A
Sbjct: 15  LGEGIGSLLFVYKKSRRRITLINLRLCFPEWSEEQRHAVAKKHFQNYARSVLERGILWWA 74

Query: 73  NPKRVLRTARIVNWELVQQALDAKAGIVFLTPHLGCFEISAQSVARHSSLSVLYRPPRKA 132
           +  R+ R   IV    V  A    +  + L PH    +++  +V   SSL  +Y      
Sbjct: 75  SEARLRRL--IVIEPGVPVAAIKASPTILLCPHFVSLDVAGVAVMLESSLCSIYTQQLNP 132

Query: 133 ALKPLIEGARARANLHLAPANLAGVRILLKALKNGQAIGLLPDQVPQNGEGVWADFFGKP 192
               ++   R+R       A   GV+ +++A+++G    +LPD      +  +  FFG  
Sbjct: 133 VFDQVLRKGRSRFRPVKLFAREEGVKPIIRAMRDGLPFFMLPDMDFGAKDAEFVPFFGVS 192

Query: 193 AYTMTLPAKLQQMSGAPIILAYAERLSWGRGYAIHFVP-FEGELGDTPEQQARAINSAME 251
           A T+T PA++   + A +I   A  L   RG+ + F P +E   GD      RA+N+ +E
Sbjct: 193 AATLTAPARIAAATKAKVIPVVATYLPDYRGWNVKFYPAWENFPGDDMLAATRAMNAFIE 252

Query: 252 KLIARCPAQYIWSYNRYKT 270
                 PA+Y W++ R+KT
Sbjct: 253 DRAREAPAEYFWTHKRFKT 271


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.323    0.138    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 554,681
Number of extensions: 23163
Number of successful extensions: 48
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 48
Number of HSP's successfully gapped: 2
Length of query: 281
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 200
Effective length of database: 733,452
Effective search space: 146690400
Effective search space used: 146690400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 128 (53.9 bits)