BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4127.p
         (271 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094303|ref|YP_001099378.1| cell division inhibitor membran...   490   e-140

>gi|134094303|ref|YP_001099378.1| cell division inhibitor membrane
           ATPase [Herminiimonas arsenicoxydans]
          Length = 271

 Score =  490 bits (1262), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 234/271 (86%), Positives = 256/271 (94%)

Query: 1   VAKIIVVTSGKGGVGKTTSSASFASGLAMRGHKTAVIDFDVGLRNLDLIMGCERRVVYDL 60
           +AKIIVVTSGKGGVGKTTSSASF SGLA+RGHKT +IDFDVGLRNLDLIMGCERRVVYDL
Sbjct: 1   MAKIIVVTSGKGGVGKTTSSASFGSGLALRGHKTVIIDFDVGLRNLDLIMGCERRVVYDL 60

Query: 61  INVINKEATLNQALIKDKHCDNLFILPASQTRDKDALTEEGVERVLGDLSKMDFEYIICD 120
           INV+NKEATLNQALIKDKHCDNLF+LPASQTRDKDAL+E+GVERVL DL+ MDFE+IICD
Sbjct: 61  INVVNKEATLNQALIKDKHCDNLFVLPASQTRDKDALSEDGVERVLQDLAAMDFEFIICD 120

Query: 121 SPAGIEHGAVMALTFADEAIVVSNPEVSSVRDSDRILGIIQAKSRRASSGGEPVKEHLLI 180
           SPAGIEHGAVMALTFADEAI+V+NPEVSSVRDSDRILGIIQAKSRRA +GGEPVKEHLLI
Sbjct: 121 SPAGIEHGAVMALTFADEAIIVTNPEVSSVRDSDRILGIIQAKSRRAQNGGEPVKEHLLI 180

Query: 181 TRYSPKRVEDGEMLSYTDVQEILRIPLIGIIPESETVLQASNQGSPAIHMKDSDVAQAYQ 240
           TRY PKRVE GEMLSYTDVQEILRIPL+GIIPESE+VL ASN G+PAIH++ S+V++AY+
Sbjct: 181 TRYVPKRVEAGEMLSYTDVQEILRIPLVGIIPESESVLHASNAGNPAIHIEGSEVSEAYK 240

Query: 241 DVVSRFLGETVELRFTTYEKPGLLQRIFGGK 271
           DVVSRFLGE + LRFT YEKPG LQRIFG K
Sbjct: 241 DVVSRFLGEEIPLRFTDYEKPGFLQRIFGSK 271


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.317    0.135    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 458,552
Number of extensions: 17899
Number of successful extensions: 50
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 50
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 1,000,347
Length adjustment: 80
Effective length of query: 191
Effective length of database: 736,747
Effective search space: 140718677
Effective search space used: 140718677
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)