BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4100.p
         (405 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094123|ref|YP_001099198.1| MFS superfamily cyanate transpo...    74   1e-14

>gi|134094123|ref|YP_001099198.1| MFS superfamily cyanate transport
           protein [Herminiimonas arsenicoxydans]
          Length = 381

 Score = 73.9 bits (180), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 163/352 (46%), Gaps = 11/352 (3%)

Query: 24  ILLIAANLRAPVTAVGPVIGLLQQSFALSAGAAGLMLTLPLLCFALVSPLAARLARGLGL 83
           ++LI  NLR  +T VGP+   +Q    L       +  LP+L   +    A+ + R LG 
Sbjct: 2   VVLIGLNLRPFLTGVGPLTSAIQDEIGLDNRGIAWLTLLPMLLMGIGGFFASSVQRMLGA 61

Query: 84  ERTLLLALLLIAGGIALRSAGSVAALLLGTCVIGCGIAGGNV--LLPSLLKRDFPDDLTR 141
              LL AL ++A G ALR        L+ T  + CGI    +  LLP L+K+ FP  +  
Sbjct: 62  RNILLGALAVLAIGSALRLVAVSGTWLIATAAL-CGIGAAFIQALLPGLIKQQFPYRIAP 120

Query: 142 MTAIYA-LTMGGASALGSVCAVPLAAALGWAWALAAFIALPLVALLAWLPQLRRDTRPAA 200
           +  +Y+   + G +    +  + +  +  W  ALA +    ++ALL     L R T P  
Sbjct: 121 VMGLYSAALLAGGALGAQLTPLSVTWSGNWHQALAWWSLPAILALLLSAQLLSRQTGPDK 180

Query: 201 PPPRAASMWRQPLAWQVTFFLGTNSLVYYVVTAWLPSILAANGDSPLQAGNLHGLMQLAS 260
               +  +  +P  W +    G  +  Y  + AWL      +G S   +G+L  +M LA 
Sbjct: 181 QAMPSLMLLGRPRTWLLMICFGLVNGGYASLVAWLAPFYQTHGWSSEHSGSLVAVMALAQ 240

Query: 261 ALPGLLLVPLGPRLRDHRP---VAVGMSAATVLSLIGLIAWPQ-ASIVWVPLFGFGTGAV 316
           A+  LLL  L  R RD RP   +++G+ A   LS I    +P  A   W  L G G G  
Sbjct: 241 AVAALLLPLLAARRRDRRPWLWLSLGLQA---LSFIAFAFFPDLAPYTWAMLSGVGLGGS 297

Query: 317 LILGLAFVGTRVSTPPQAAALSAMAQSVGYLLAATGPIVMGRLHDASGGWTA 368
             L L      +  P QA ALSA+ Q+ G+L+AA  P +   ++D SGG+ A
Sbjct: 298 FSLSLIVALDHLPDPRQAGALSALMQAGGFLIAAIAPWLTAIIYDFSGGFAA 349


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.324    0.138    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 556,205
Number of extensions: 18233
Number of successful extensions: 137
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 134
Number of HSP's successfully gapped: 3
Length of query: 405
Length of database: 1,000,347
Length adjustment: 84
Effective length of query: 321
Effective length of database: 723,567
Effective search space: 232265007
Effective search space used: 232265007
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 130 (54.7 bits)