BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4097.p
         (314 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134093898|ref|YP_001098973.1| putative 5'-nucleotidase [Hermi...   322   1e-89

>gi|134093898|ref|YP_001098973.1| putative 5'-nucleotidase
           [Herminiimonas arsenicoxydans]
          Length = 309

 Score =  322 bits (826), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 166/301 (55%), Positives = 217/301 (72%), Gaps = 4/301 (1%)

Query: 1   MPYDLSDKLVIGISSRALFDLEAENAIYDEQGVDAYAEYQRAHENDPLQPGTAFPLVKAL 60
           MP  L   LV+GISSRALFDLE E AI+  +G++AY  +Q  HEN+ L+ G  F LV+AL
Sbjct: 1   MPVSLDRLLVVGISSRALFDLEVEEAIFRNEGLEAYRRHQLDHENEILKLGAGFALVRAL 60

Query: 61  LRLNDLIPERRLVEVVVISRNTPDTGLRAFNAIAAHKLDISRAAFTGGGATAPYLQAFKI 120
           L+LN L P++RLVEVV++SRN+ +T +R FN+I  + LDI+RA  +GG + APYLQAF +
Sbjct: 61  LKLNALTPDQRLVEVVIMSRNSTETSMRIFNSIKHYDLDITRAVLSGGASLAPYLQAFNV 120

Query: 121 DLFLSRDTGDVQEAIDAGVAAAQLYAAPLDYSAPDNQIRIAFDGDAVLFSAESERIFAEK 180
            LFLS    DVQ A+++ VAAA LY  P +     +QIRIAFDGDAV+FS ESE I+  +
Sbjct: 121 SLFLSLHEDDVQAAVNSNVAAALLYQKPANALEELDQIRIAFDGDAVIFSDESELIYQTQ 180

Query: 181 GLEAFARHEQRHRKKAMKEGPFAKLLLALSAIQKQFPPKQC----PVRIAIVTARNSPAH 236
           G+EAF +HE  +  K + EGPFA+LL ALS IQ  F   Q     P+R A+VTAR+SPAH
Sbjct: 181 GIEAFEKHEHENALKPLPEGPFARLLKALSFIQNSFRNAQGSATPPIRTALVTARSSPAH 240

Query: 237 QRVIHTLRTWNVTVDEAFFLGGLNKAEVLQAFGAHMFFDDQEGHVQKAAVVVPSGRVPYK 296
           +RVI TLR W+VT+DE FF+GG+ K++VL AF  HMFFDDQ GH  +A+ +V +GRVP +
Sbjct: 241 ERVIRTLRAWDVTIDETFFMGGVAKSDVLAAFKPHMFFDDQAGHCDRASPLVQTGRVPLR 300

Query: 297 G 297
           G
Sbjct: 301 G 301


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.320    0.136    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 621,853
Number of extensions: 25891
Number of successful extensions: 69
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 64
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 1,000,347
Length adjustment: 82
Effective length of query: 232
Effective length of database: 730,157
Effective search space: 169396424
Effective search space used: 169396424
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)