BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4054.p
         (383 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096274|ref|YP_001101349.1| deoxyguanosinetriphosphate trip...   588   e-169

>gi|134096274|ref|YP_001101349.1| deoxyguanosinetriphosphate
           triphosphohydrolase-like protein [Herminiimonas
           arsenicoxydans]
          Length = 382

 Score =  588 bits (1516), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 284/376 (75%), Positives = 321/376 (85%), Gaps = 1/376 (0%)

Query: 8   HLAPYAAHSASSRGRRYSETPPGSRSEFQRDRDRIVHSTAFRRLEYKTQVFVNHEGDLFR 67
           HLAPYAA S  S GRR+SE    SR+EFQRDRDRI+HS AFRRLEYKTQVFVNHEGDLFR
Sbjct: 6   HLAPYAARSEQSAGRRFSEPSTSSRTEFQRDRDRIIHSAAFRRLEYKTQVFVNHEGDLFR 65

Query: 68  TRLTHSIEVAQIARSCARNLQLNEDLVEAISLAHDLGHTPFGHAGQDELNHCMKHHGGFE 127
           TRLTHSIEVAQIARS ARNLQLNEDL+EAISLAHDLGHTPFGHAGQD LN CM  +GGFE
Sbjct: 66  TRLTHSIEVAQIARSIARNLQLNEDLIEAISLAHDLGHTPFGHAGQDALNACMSEYGGFE 125

Query: 128 HNLQSLRVVDELEQHYGAFDGLNLTFETREGILKHCSLHNARQLGEIGVRFLERKQPSLE 187
           HNLQSLRVVD LEQ YGAFDGLNL FETREGILKHCSL NA++L  IG+RF+E+KQP+LE
Sbjct: 126 HNLQSLRVVDTLEQRYGAFDGLNLMFETREGILKHCSLANAKKLDAIGLRFIEKKQPALE 185

Query: 188 AQLANLADEIAYNNHDIDDGLRSGLLTMELMSEVDFFGRHLREVTQAYPGITGRRVIHET 247
           AQLANLADEIAYNNHDIDDGLRSGLLT   + EVDF+ RH  +V  A+PGI GRR I+ET
Sbjct: 186 AQLANLADEIAYNNHDIDDGLRSGLLTTAQLDEVDFYARHRYQVELAFPGINGRRAINET 245

Query: 248 VRRMINALIVDLIQTSRAHIAEIAPRDIEEVRNAPPLIAFSNAMASEAAELKKFLREKLY 307
           +RRMINALIVD+I TSR  I     + I++VRNAP LIAFS+ M +EA  LK+FLRE LY
Sbjct: 246 IRRMINALIVDVIDTSRQRIQAAQVKTIDDVRNAPALIAFSDGMRAEAVVLKRFLRENLY 305

Query: 308 RHYQVNRMTAKARRIIAEMFEAFMGQPNLLPPDYQVKGIADDTQRLDKQARKVADYIAGM 367
           +HYQVNRMT+KARRI+AE+F+AFM +PNLLPPDYQ + ++D  Q    QARKVADYIAGM
Sbjct: 306 QHYQVNRMTSKARRIVAELFDAFMREPNLLPPDYQ-QVVSDTPQARAVQARKVADYIAGM 364

Query: 368 TDRYAIREHRRLFVME 383
           TDRYAIREH+RLF+++
Sbjct: 365 TDRYAIREHKRLFLID 380


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.322    0.136    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 698,978
Number of extensions: 27727
Number of successful extensions: 86
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 1,000,347
Length adjustment: 83
Effective length of query: 300
Effective length of database: 726,862
Effective search space: 218058600
Effective search space used: 218058600
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)