BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4019.p
         (378 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096070|ref|YP_001101145.1| heme O oxygenase [Herminiimonas...   436   e-124

>gi|134096070|ref|YP_001101145.1| heme O oxygenase [Herminiimonas
           arsenicoxydans]
          Length = 379

 Score =  436 bits (1122), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/364 (64%), Positives = 270/364 (74%), Gaps = 1/364 (0%)

Query: 6   LIQLGLTGLVVALIPLALVWRAQGVANKYRKLVWVTLFFTFDLIMFGAFTRLTDSGLGCP 65
           L QL   GL VAL+   +VW ++   NKYRKLVWVT+F TFD+IMFGAFTRLTDSGLGCP
Sbjct: 2   LFQLASKGLFVALLACVIVWSSRD-PNKYRKLVWVTMFLTFDVIMFGAFTRLTDSGLGCP 60

Query: 66  DWPGCYSHANPLLAHEHINAAEEAMPFGPVTWAKAWIEMIHRYFAMAVGFLIIVLMVVAW 125
           DWPGCY HANPL A EHI AAE  MP GPVT  KAW+EMIHRY AM +G LII ++V+AW
Sbjct: 61  DWPGCYGHANPLQALEHIRAAEALMPDGPVTVMKAWVEMIHRYLAMGIGVLIIAIVVIAW 120

Query: 126 RRWLKSGKTELQFRPWFPTALLGFVCLQGAFGAWTVTMKLQPIIVTTHLLLALTLLAMLV 185
           R WL+SG+T  +F P +P  LL FVC+QGAFGAWTVTMKLQPIIVT HLLL + LL ML 
Sbjct: 121 RFWLQSGRTLTRFSPRYPMLLLFFVCVQGAFGAWTVTMKLQPIIVTIHLLLGMALLGMLT 180

Query: 186 WLAARQETHVPVSAAGRALIVPATCGAALLALQIALGGWVSTNYAALACSDFPLCNGKLV 245
           W+ ARQ+ H  V A    L  PA     LL++QIALGGWVSTNYAALACSDFPLC+G LV
Sbjct: 181 WVGARQKDHPFVDARALTLRTPALLALVLLSMQIALGGWVSTNYAALACSDFPLCHGALV 240

Query: 246 PDMDFQHGFTLWRHLGMTASGDYLPVEALTAIHWVHRSFAFVVILYVVWLAQRALHDEGL 305
           P MDF+HGFTLWR LG TA GDYLP +ALTAIHW HR FA  V+  + W A +AL   GL
Sbjct: 241 PQMDFEHGFTLWRELGKTAGGDYLPFDALTAIHWTHRMFALAVVAVLGWTAWKALSIPGL 300

Query: 306 RKTARWLLTVLGLQLCTGLATIYLNWPLAIAVLHNGGAALLVILMVMLNYKVRYAPSSLA 365
           R TAR +L  L LQ+  G+AT+ L WPLA+AV HNG AALLV+L+VMLNYK R    S  
Sbjct: 301 RTTARGVLAALVLQIVIGIATVSLKWPLALAVAHNGCAALLVLLLVMLNYKARIPSPSGQ 360

Query: 366 TAAP 369
              P
Sbjct: 361 NREP 364


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.329    0.139    0.464 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 726,805
Number of extensions: 28680
Number of successful extensions: 110
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 107
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 1,000,347
Length adjustment: 83
Effective length of query: 295
Effective length of database: 726,862
Effective search space: 214424290
Effective search space used: 214424290
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 129 (54.3 bits)