BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3833.p (1033 letters) Database: BlastDatabases/690/690 3295 sequences; 1,000,347 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|134095880|ref|YP_001100955.1| aminoglycoside/multidrug efflux... 1165 0.0 gi|134095559|ref|YP_001100634.1| aminoglycoside/multidrug efflux... 1006 0.0 gi|134094275|ref|YP_001099350.1| multidrug ABC transporter membr... 357 2e-99 gi|134094813|ref|YP_001099888.1| RND divalent metal cation efflu... 263 3e-71 gi|134093787|ref|YP_001098862.1| RND divalent metal cation efflu... 254 2e-68 >gi|134095880|ref|YP_001100955.1| aminoglycoside/multidrug efflux pump [Herminiimonas arsenicoxydans] Length = 1049 Score = 1165 bits (3015), Expect = 0.0, Method: Compositional matrix adjust. Identities = 576/1012 (56%), Positives = 744/1012 (73%), Gaps = 2/1012 (0%) Query: 1 MPRFFIDRPIFAWVLALFIVLLGVIAMSQLPIARYPSVAPPSVSINATYPGATPQTMNDG 60 M +FFIDRP+FAWVLA+FI+L G +A++ LP+++YP++APP++ I ATYPGAT QT++D Sbjct: 1 MGKFFIDRPVFAWVLAIFIMLAGALAITSLPVSQYPNIAPPTIVITATYPGATAQTLDDS 60 Query: 61 VISLIERELSGVKNLLYFESSADTSGSAQISVTFKPGTDPELAQVDVQNKLKAIEARLPQ 120 V SLIE+E++G L Y ES + +G QI+VTF P T+P+LA VDV N+LK +EARLP Sbjct: 61 VTSLIEQEMNGADGLQYVESQSQANGQVQITVTFSPETNPDLAAVDVSNRLKRVEARLPA 120 Query: 121 TVRQNGVTVESAASGFLLMVSLTSTDGRYDEVRLSDYLARNIVEELRRVDGVGRVQLFGA 180 V Q GV V A S FL+ + L+STDGR D V L DYL+RN++ E++RV GVG+ QLFG Sbjct: 121 AVTQQGVQVAKARSNFLMFIGLSSTDGRLDPVALGDYLSRNVLNEVKRVPGVGQAQLFGT 180 Query: 181 EQAMRIWIDPFKLNAFGLTVGDISAAISQQNAQIAPGRLGDSPTVPGQQIAVPLTVQGQL 240 E+AMRIWIDP KL LT +++AAI+ QNA +A G LGD P+ QQI+ + V GQL Sbjct: 181 ERAMRIWIDPNKLVGLNLTPAEVTAAINTQNALVAGGILGDLPSPSSQQISATVVVNGQL 240 Query: 241 QSPAQFAAIVLKAKPDGSRVLLGDVARVELGAQSYAFSNREDGKPAGVAAVQLSPGANAV 300 SP +F I+L+A DGS V L DVAR+E+G QSY S R DG P VQLSP ANA+ Sbjct: 241 SSPEEFGKIILRANKDGSSVRLRDVARIEVGGQSYQTSGRLDGNPTSFIGVQLSPTANAL 300 Query: 301 RTAAAIQARMDELRPSLPPGMHFSLPYNTAPFVKISIQKVVQTLIEAMVLVFLVMYLFLQ 360 TA A+ +M++L P G+ +++PY+T+ FVKISI++VV+TLIEA++LVFLVMYLFLQ Sbjct: 301 GTATAVHKKMEDLARYFPAGVKYTVPYDTSKFVKISIEEVVKTLIEAIILVFLVMYLFLQ 360 Query: 361 NVRYTIIPAIVAPIALLGTLAVMLAVGYSVNVLTMFGMVLAIGIIVDDAIVVVENVERIM 420 N+RYT+IP IV P+ALLGT A +L G+S+NVLTMFGMVLAIGI+VDDAIVVVENVERIM Sbjct: 361 NIRYTLIPTIVVPVALLGTFATLLVFGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 420 Query: 421 AQEGLGPREATIKAMREITGAIVGITLVLTAVFIPMALAGGSVGVIYRQFALAMAVSILF 480 ++EGL PR+AT KAM +ITGAI+GITLVL AVF+PMA GG+VG IYRQF+L+M S++F Sbjct: 421 SEEGLSPRDATRKAMGQITGAIIGITLVLIAVFLPMAFFGGAVGAIYRQFSLSMVASMVF 480 Query: 481 SAFLALSLTPALCATLLQPVAPG-HHDKRGFFGAFNRGFMRLTARYESVLGRLVARGLRM 539 SA +A +LTPALCAT+L+PV G HH+K GFFG FNR F + + Y+ +G+++ + R Sbjct: 481 SALMAFTLTPALCATILKPVEKGHHHEKGGFFGWFNRIFHKTSLSYQGFIGKMLTKTTRY 540 Query: 540 MLVYAALSALLVLGLQALPSAFLPEEDQGYFMTSFQLPADATAERTARAVDQFEQYLKTR 599 M+VY + A + L LP++FLP EDQGY +T+ QLPA A++ RT + Q E+Y + Sbjct: 541 MIVYGLIVACVGLLYARLPASFLPSEDQGYIITNVQLPAGASSGRTLEVLKQIEEYYLKQ 600 Query: 600 QDIGANLSVLGFGFSGSGPNAAMAFTELKDWKLRHGATAADE-AHQAQLAMEAAGDGMVM 658 + +S+ GF FSG+G NA + FT DW R AD A +A A D +V Sbjct: 601 PAVEHVISISGFSFSGNGQNAGLVFTPFIDWSKRGKEDTADAIAGRAFGAFSQIKDAIVF 660 Query: 659 SLLPPAIEELGNSSGFAMRLQDRANQGYDALKAAEAQLLALAAKSSKLSGVYSDGLPAGA 718 L PP I ELGN++GF RLQDR G+DAL AA QLL +A +S L+GV +GL Sbjct: 661 PLNPPPIRELGNATGFTFRLQDRGGLGHDALVAARNQLLGMAGQSKILAGVRPEGLEDAP 720 Query: 719 SIQLDVDRHKAAALGVSFANISDTLSAAMGSFYVNDFPNQGRMQQVILQARADARMQIED 778 +QLD+DR KA ALGV FA+I+ LS ++GS YVNDFPNQGR Q+VI+QA A R+Q +D Sbjct: 721 QLQLDIDRDKANALGVPFASINSVLSTSLGSSYVNDFPNQGRQQRVIVQADAPRRLQADD 780 Query: 779 VMKLYVRNQSGGMVPLAELVKASWRVVPTQLQRYQGFPAVRISGSAAPGVASGEAMAEME 838 + KLY R+ +G MVP + + + W P QL RY G+PA++ISG PG ++G+AM EME Sbjct: 781 LTKLYARSTTGAMVPFSSFITSKWITGPVQLIRYNGYPAMKISGGVKPGFSTGDAMKEME 840 Query: 839 RLAQQLPPGFAVAWTGQSLQERLSAAQAPLLMALSMLVVFLVLAALYESWSIPLSVMLVV 898 L Q+LP G WTGQSL+E+ S QAP L ALS++ VFLVLAALYES SIPLSVMLVV Sbjct: 841 ALVQKLPAGIGYEWTGQSLEEQTSGNQAPALYALSLIAVFLVLAALYESTSIPLSVMLVV 900 Query: 899 PLGLIGAVLAVILRDLPNDVFFKVGMITVIGLSAKNAILIVEFAKQLHTEGMGLVPAAIR 958 PLG++GA+L V LR +PNDV+FKVGMI V+GLSAKNAILI+EFAK L +G GL+ A + Sbjct: 901 PLGILGALLGVTLRGMPNDVYFKVGMIAVVGLSAKNAILIIEFAKDLQAQGKGLIEATLE 960 Query: 959 AAVLRLRPILMTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATLLA 1010 A LR RPI+MTSLAF LGV+PL++ASGA + +QRAIGTGV GGM++AT+LA Sbjct: 961 AVHLRFRPIIMTSLAFILGVLPLVIASGAGSASQRAIGTGVMGGMITATVLA 1012 >gi|134095559|ref|YP_001100634.1| aminoglycoside/multidrug efflux pump [Herminiimonas arsenicoxydans] Length = 1053 Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust. Identities = 519/1026 (50%), Positives = 710/1026 (69%), Gaps = 5/1026 (0%) Query: 1 MPRFFIDRPIFAWVLALFIVLLGVIAMSQLPIARYPSVAPPSVSINATYPGATPQTMNDG 60 M RFFIDRPIFAWVL++ I+L G +A+ LPI++YP++APP+VSI ATYPGA+ + + + Sbjct: 1 MARFFIDRPIFAWVLSIIIMLAGGLAIFTLPISQYPTIAPPTVSIQATYPGASAKVVENS 60 Query: 61 VISLIERELSGVKNLLYFESSADTSGSAQISVTFKPGTDPELAQVDVQNKLKAIEARLPQ 120 V +IE+ + G+ L+Y +++ +GSAQ+++TF TDP++AQV VQNKL+ LPQ Sbjct: 61 VTQIIEQNMKGLDGLIYMSATSSATGSAQLTLTFDNKTDPDIAQVQVQNKLQLASPLLPQ 120 Query: 121 TVRQNGVTVESAASGFLLMVSLTSTDGRYDEVRLSDYLARNIVEELRRVDGVGRVQLFGA 180 V++ GV V AASGFL +V S DG D+ +SDY+A N+V+ L RV GVG +Q+FG+ Sbjct: 121 EVQRQGVVVSKAASGFLQVVGFVSEDGSMDKDDISDYVAANLVDPLSRVPGVGNIQVFGS 180 Query: 181 EQAMRIWIDPFKLNAFGLTVGDISAAISQQNAQIAPGRLGDSPTVPGQQIAVPLTVQGQL 240 + +MRIW+DP KL+ + L DI A I QNAQ+A G+LG +P+ PGQQ+ ++ Q +L Sbjct: 181 KYSMRIWLDPNKLDTYKLATTDIIATIRAQNAQVAVGQLGGAPSAPGQQLNATISAQDRL 240 Query: 241 QSPAQFAAIVLKAKPDGSRVLLGDVARVELGAQSYAFSNREDGKPAGVAAVQLSPGANAV 300 Q+P QF AIV+++ PDGS + LGD+ARVELGA++Y +R +GKPA + LS GANA+ Sbjct: 241 QTPEQFRAIVIRSNPDGSTLKLGDIARVELGAENYETISRYNGKPATGVLISLSTGANAL 300 Query: 301 RTAAAIQARMDELRPSLPPGMHFSLPYNTAPFVKISIQKVVQTLIEAMVLVFLVMYLFLQ 360 TA I+ +++EL+P P G+ +P++T PF+ +SI+ VV TL+EA+ LVFLVMYLF+Q Sbjct: 301 DTAVGIKNKLEELKPYFPAGLTAVVPFDTTPFISVSIKGVVVTLLEAIALVFLVMYLFMQ 360 Query: 361 NVRYTIIPAIVAPIALLGTLAVMLAVGYSVNVLTMFGMVLAIGIIVDDAIVVVENVERIM 420 N+R T+IP I P+ LLGT ++ A+G+S+N+LTMF MVLAIG++VDDAIVVVENVERIM Sbjct: 361 NIRATLIPTIAVPVVLLGTFGILAALGFSINMLTMFAMVLAIGLLVDDAIVVVENVERIM 420 Query: 421 AQEGLGPREATIKAMREITGAIVGITLVLTAVFIPMALAGGSVGVIYRQFALAMAVSILF 480 +EGL P EAT K+M +ITGA+VGI LVL+AVF+PMA GGS G+IYRQF + ++ Sbjct: 421 TEEGLSPLEATRKSMDQITGALVGIALVLSAVFVPMAFLGGSTGIIYRQFTATIVSAMAL 480 Query: 481 SAFLALSLTPALCATLLQPVAPGHHDK-RGFFGAFNRGFMRLTARYESVLGRLVARGLRM 539 S +A+ LTPALCAT+L+PV G H K GFF FNR F R + +Y+S + ++ RG R Sbjct: 481 SVLVAVVLTPALCATMLKPVKKGEHGKTTGFFAWFNRNFDRSSVKYQSGVRGILGRGKRF 540 Query: 540 MLVYAALSALLVLGLQALPSAFLPEEDQGYFMTSFQLPADATAERTARAVDQFEQYLKTR 599 M ++ AL ++VL LPS+FLP EDQG + Q P AT ERT A+ + E + T Sbjct: 541 MAIFLALIVVMVLLFVRLPSSFLPNEDQGILFSLIQTPVGATQERTLEAIKKVEHHFLTD 600 Query: 600 QD--IGANLSVLGFGFSGSGPNAAMAFTELKDWKLRHGATAADE--AHQAQLAMEAAGDG 655 + + + +V GF F+G+G N MAF +LKDW R A + + A +A A D Sbjct: 601 EKDAVESIFTVQGFSFAGTGQNNGMAFIKLKDWSERTSAESQIDAVAGRAMGAFSQIKDA 660 Query: 656 MVMSLLPPAIEELGNSSGFAMRLQDRANQGYDALKAAEAQLLALAAKSSKLSGVYSDGLP 715 + PPAI ELG ++GF+ L+D AN G+DAL A QLL AA+S L+ V +G Sbjct: 661 FAFAFAPPAIPELGTAAGFSFFLKDNANLGHDALVQARNQLLGAAAQSKLLAKVRPNGQE 720 Query: 716 AGASIQLDVDRHKAAALGVSFANISDTLSAAMGSFYVNDFPNQGRMQQVILQARADARMQ 775 ++D+D KA+A G+S A+I+ TLS A G Y++DF ++GR+++V +QA A RM Sbjct: 721 DSPQFRIDIDTQKASAQGLSIADINSTLSTAWGGQYIDDFIDRGRVKRVYMQADAPFRMV 780 Query: 776 IEDVMKLYVRNQSGGMVPLAELVKASWRVVPTQLQRYQGFPAVRISGSAAPGVASGEAMA 835 ED VRN G MVP + A W +L+RY G A+ I G AAPG++SG +M Sbjct: 781 PEDFKLWSVRNNQGQMVPFSAFASARWEYGSPRLERYNGVSAMEIQGEAAPGISSGASMD 840 Query: 836 EMERLAQQLPPGFAVAWTGQSLQERLSAAQAPLLMALSMLVVFLVLAALYESWSIPLSVM 895 E+ERLA QLP GF + WT S QER + +Q LL LS+L+VFL LAALYESW+IP +V+ Sbjct: 841 EIERLAGQLPAGFGIEWTALSYQERQAGSQTTLLYTLSLLIVFLCLAALYESWTIPTAVL 900 Query: 896 LVVPLGLIGAVLAVILRDLPNDVFFKVGMITVIGLSAKNAILIVEFAKQLHTEGMGLVPA 955 LV PLG++GAVLA L + DV+F+V M+T +GL++KNAILIVEFAK GM L+ A Sbjct: 901 LVAPLGILGAVLANTLAGMERDVYFQVAMLTTVGLTSKNAILIVEFAKANLESGMELIDA 960 Query: 956 AIRAAVLRLRPILMTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATLLAVLFVP 1015 ++A +RLRPI+MTSLAF LGV+PL LASGA + QRAIGTGV GGM+ TLL + F+P Sbjct: 961 TLQAVRVRLRPIIMTSLAFGLGVLPLALASGAGSGAQRAIGTGVVGGMIVGTLLGIFFIP 1020 Query: 1016 VFFVVV 1021 +FFV+V Sbjct: 1021 LFFVLV 1026 >gi|134094275|ref|YP_001099350.1| multidrug ABC transporter membrane protein [Herminiimonas arsenicoxydans] Length = 1034 Score = 357 bits (916), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 296/1032 (28%), Positives = 511/1032 (49%), Gaps = 39/1032 (3%) Query: 3 RFFIDRPIFAWVLALFIVLLGVIAMSQLPIARYPSVAPPSVSINATYPGATPQTMNDGVI 62 I RP+ +L++ +V++G +LPIA PS P +++ A+ PGA+P+ M V Sbjct: 5 ELCIRRPVMTVLLSIAVVVVGFFCYFKLPIAALPSYDTPVINVTASLPGASPEVMASSVA 64 Query: 63 SLIERELSGVKNLLYFESSADTSGSAQISVTFKPGTDPELAQVDVQNKLKAIEARLPQTV 122 + +E++ S + + SS+ T G+ I + F D + A VDVQ L + LP+ + Sbjct: 65 TPLEKQFSTIAGVATISSSS-TLGNTSIVLEFDQNRDIDAAAVDVQAALLRAQRSLPEEM 123 Query: 123 RQNGVTVESAASGFLLMVSLTSTDGRYDEVRLSDYLARNIVEELRRVDGVGRVQLFGAEQ 182 + ++ L T L+DY I L +DGV +VQ++G + Sbjct: 124 -NDLPAYRKVNPADAAILLLALTSPSLSLSELNDYAENLISPSLSTIDGVAQVQVYGQRR 182 Query: 183 -AMRIWIDPFKLNAFGLTVGDISAAISQQNAQIAPGRLGDSPTVPGQQIAVPLTVQGQLQ 241 A+RI + P +L A +T+ +I+A+I NA G L G + + L QLQ Sbjct: 183 YAVRIKVKPSELAARNMTLDEIAASIRAANANSPVGVLD------GPRQTLTLQANRQLQ 236 Query: 242 SPAQFAAIVLKAKPDGSRVLLGDVARVELGAQSYAFSNREDGKPAGVAAVQLSPGANAVR 301 + F +V+ + G L DVA VE +S + +GKP+ V AVQ P AN V Sbjct: 237 NAEAFGNLVISSS-KGQTTRLKDVATVEDSVESTKSGSWVNGKPSIVLAVQRQPNANTVA 295 Query: 302 TAAAIQARMDELRPSLPPGMHFSLPYNTAPFVKISIQKVVQTLIEAMVLVFLVMYLFLQN 361 A++ + + +P + + + + ++ +I V TL+ ++LV LV++LFL+ Sbjct: 296 VVDAVKHTLPLFQSQMPASIDLQVLNDRSVSIREAIHDVKLTLLLTILLVVLVIFLFLKR 355 Query: 362 VRYTIIPAIVAPIALLGTLAVMLAVGYSVNVLTMFGMVLAIGIIVDDAIVVVENVERIMA 421 + T IP + PI+L+G A+M +G+S++ +++ G+ +A+G++VDDAIV++EN+ R + Sbjct: 356 LTATAIPVLSLPISLIGCCALMYWMGFSLDNVSLLGITIAVGLVVDDAIVMLENIVRHI- 414 Query: 422 QEGLGPREATIKAMREITGAIVGITLVLTAVFIPMALAGGSVGVIYRQFALAMAVSILFS 481 ++G+ P A +K RE++ I+ I++ L AVFIP+ G +G++ +FA +++++L S Sbjct: 415 EDGMEPLAAALKGSREVSFTIISISISLVAVFIPIFFMPGVIGLLLHEFAAVVSLAVLVS 474 Query: 482 AFLALSLTPALCATLLQPVAPGHHD------KRGFFGAFNRGFMRLTARYESVLGRLVAR 535 A ++L+L P LC+ L+ GH + + +F + F RL A Y L +A Sbjct: 475 AVMSLTLVPMLCSRFLKHEKAGHENDAVQPQENWLIRSFEKVFNRLLASYTRALDWSLAH 534 Query: 536 GLRMMLVYAALSALLVLGLQALPSAFLPEEDQGYFMTSFQLPADATAERTARAVDQFEQY 595 M+++ A L +P F P ED G + + P DA+ + V Sbjct: 535 RTTMLVLAAGTFVLTAYLFITIPKGFFPTEDIGQISVTIEGPQDASYPTMVKLVTAVGTI 594 Query: 596 LKTRQDIGANLSVLGFGFSGSGPNAAMAFTELKDWKLRHGATAADEAHQAQLAMEAAGDG 655 ++ ++ N F LK R A +A++ A G Sbjct: 595 IQNDPNVETA------TMRTRDSNVGNMFVGLKPRTAREPMDAVLRGLRAKV---KAVPG 645 Query: 656 MVMSLLPPAIEELG---NSSGFAMRLQD-RANQGYDALKAAEAQLLALAAKSSKLSGVYS 711 + + L P LG + S F LQ RA D L ++ A V S Sbjct: 646 VTVYLTPVQNLRLGGRTSKSQFQYVLQSVRA----DELNVWAEKIQAEMRADGSFIDVTS 701 Query: 712 DGLPAGASIQLDVDRHKAAALGVSFANISDTLSAAMGSFYVNDFPNQGRMQQVILQARAD 771 D G +D++R +A GV A+I L +A G V+ VILQ + Sbjct: 702 DSQLKGLQAVVDINRDRANEAGVGIADIRTALYSAYGDRQVSTIYTSSNSYSVILQDESV 761 Query: 772 ARMQIEDVMKLYVRNQSGGMVPLAELVKASWRVVPTQLQRYQGFPAVRISGSAAPGVASG 831 R D+ K+Y+R+++G +VPL + P + A+ IS + APG+ G Sbjct: 762 GRQDESDLSKIYLRSKTGVLVPLLSVATVKRTAGPISVNHQGQLQAITISFNLAPGIPLG 821 Query: 832 EAMAEMERL--AQQLPPGFAVAWTGQSLQERLSAAQAPLLMALSMLVVFLVLAALYESWS 889 +A +++++ A LP + G + + S A L+ L+++V++++L LYES+ Sbjct: 822 DATRKVDQIKDAISLPSSIVTNYAGDAAVFQSSQASQIALVVLALVVIYILLGVLYESYI 881 Query: 890 IPLSVMLVVPLGLIGAVLAVILRDLPNDVFFKVGMITVIGLSAKNAILIVEFAKQLHTEG 949 P++++ +P +GA+L + + + +G++ +IGL KNAI++++FA E Sbjct: 882 HPVTILAGLPSAAVGALLTLRIFGFELTMIAMIGILLLIGLVKKNAIMMIDFALAAQRE- 940 Query: 950 MGLVP-AAIR-AAVLRLRPILMTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSAT 1007 GL P AIR A +LR RPI+MT+LA A+G +P+ L GA AE ++ +G V GG++ + Sbjct: 941 QGLTPLEAIRTACILRFRPIMMTTLAAAVGALPIALGLGAGAELRQPLGLAVVGGLMVSQ 1000 Query: 1008 LLAVLFVPVFFV 1019 ++ +L PV ++ Sbjct: 1001 VITLLITPVIYL 1012 >gi|134094813|ref|YP_001099888.1| RND divalent metal cation efflux transporter [Herminiimonas arsenicoxydans] Length = 1064 Score = 263 bits (672), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 283/1061 (26%), Positives = 488/1061 (45%), Gaps = 107/1061 (10%) Query: 3 RFFIDRPIFAWVLALFIVLLGVIAMSQLPIARYPSVAPPSVSINATYPGATPQTMNDGVI 62 RF ID+ ++ + I LG+ +LPI P + V IN++ PG +P + Sbjct: 7 RFAIDQRWLVMLMTIGIAALGIYNYQKLPIDAVPDITNVQVQINSSAPGYSPLEAEQRIT 66 Query: 63 SLIERELSGVKNLLYFESSADTS--GSAQISVTFKPGTDPELAQVDVQNKLKAIEARLPQ 120 IE ++G L + E + S G +Q++V FK GTD A+ V +++ +LP Sbjct: 67 FPIETVMAG---LPFLEQTRSISRYGLSQVTVIFKEGTDIYFARQMVNERIQEAREKLPP 123 Query: 121 TVRQNGVTVESAASGFLLMVSLTST------DGR-YDEVRLSDYLARNIVEELRRVDGVG 173 V G+ S G + M ++ S DG+ Y L + I +LR V GV Sbjct: 124 GVNP-GMGPISTGLGEIYMWTVESKPGALKPDGKPYTPTDLREIQDWIIKPQLRNVPGVT 182 Query: 174 RVQLFGAEQAMRIWIDPF--KLNAFGLTVGDISAAISQQNAQIAPGRLGDSPTVPGQQIA 231 + G A + PF KL A GL++GD+ +A+ + N + G + G+Q Sbjct: 183 EINTIGG-NAKEFQVAPFPDKLIAHGLSLGDLVSALERNNNNVGAGYIEKR----GEQYL 237 Query: 232 VPLTVQGQLQSPAQFAAIVLKAKPDGSRVLLGDVARVELGAQSYAFSNREDGKPAGVAAV 291 + GQ+ IV+ + G + + DVA V +G + + E+GK + V Sbjct: 238 I--RAPGQVADLNDIGNIVISTR-QGVPLRIRDVADVVIGKELRTGAATENGKEVVLGTV 294 Query: 292 QLSPGANAVRTAAAIQARMDELRPSLPPGMHFSLPYNTAPFVKISIQKVVQTLIEAMVLV 351 + G N+ AAA+ +M E+ SLP G+ Y+ V +I V + L+E +LV Sbjct: 295 FMLIGENSRSVAAAVDKKMKEINRSLPKGIVADTVYDRTVLVDKAISTVKKNLMEGALLV 354 Query: 352 FLVMYLFLQNVRYTIIPAIVAPIALLGTLAVMLAVGYSVNVLTMFGMVLAIGIIVDDAIV 411 +++LFL N+R II A+V P+A+L T M+ S N++++ L GII+D A+V Sbjct: 355 IAILFLFLGNIRAAIITAMVIPLAMLFTFTGMVGNKVSANLMSLGA--LDFGIIIDGAVV 412 Query: 412 VVEN-VERIMAQEGLGPREAT--------IKAMREITGAIVGITLVLTAVFIPMALAGGS 462 +VEN + R+ + R T A +E ++ L++ V++P+ G Sbjct: 413 IVENCIRRLSHAQAHAGRALTRNERFHEVFAASKEARRPLIFGQLIIMVVYLPIFALSGV 472 Query: 463 VGVIYRQFALAMAVSILFSAFLALSLTPALCATLLQPVAPGHHDKRGFFGAFNRGFMRLT 522 G ++ A + ++++ + L+L+ PA A L+ NR + Sbjct: 473 EGKMFHPMAFTVVIALVGAMILSLTFIPAAVALLIGDKVSEKE---------NRLMVWSK 523 Query: 523 ARYESVLGRLVARG---LRMMLVYAALSALLVLGLQALPSAFLPEEDQGYF-MTSFQLPA 578 RYE +L ++ L M+ V LS LL + + S F+P ++G + + ++P Sbjct: 524 RRYEPILDWVMLSKPLVLTMVAVVIVLSGLL---MTRMGSEFIPSLNEGDIALHAMRIPG 580 Query: 579 DATAERTARAVDQFEQYLKTRQDIGANLSVLGFGFSGSGP---NAAMAFTELK---DWKL 632 + + + E+ +K ++ LG + P N A F LK +W Sbjct: 581 TSLTQ-AIEMQKELERNIKLFPEVSRVFGKLGTAEIATDPMPPNVADTFVILKPQSEW-- 637 Query: 633 RHGATAADEAHQAQL--AMEAAGDGMVMSLLPPAIEELGNSSGFAMRLQDRANQGYDALK 690 + +A+L AM+ A +S +P GN+ F +Q R N+ ++ Sbjct: 638 -----PEPKRSKAELVTAMQEA-----VSKVP------GNNYEFTQPIQMRFNELISGVR 681 Query: 691 AAEA------QLLALAAKSSKLSGVYSDGLPAGASIQLD-----------VDRHKAAALG 733 + A + A+ A + ++SGV S G+ A ++++ +DR K A LG Sbjct: 682 SDVAVKVFGDDMDAMNATAEQISGVLS-GISGAADVKVEQTTGLPMLTVKIDREKVARLG 740 Query: 734 VSFANISDTLSAAMGSFYVNDFPNQGRMQQVILQARADARMQIEDVMKLYVR------NQ 787 V+ ++ + LS A+G + ++++ R IE + K+ +R Q Sbjct: 741 VNVGDVQEALSIAVGGREAGMLFEGDKRFDILVRLPESVRNDIETIKKIPIRLPTLDGTQ 800 Query: 788 SG--GMVPLAELVKASWRVVPTQLQRYQGFPAVRISGSAAPGVASGEAMAEMERLAQ--- 842 SG G L ++ + P Q+ R G V ++ S G G + E ++ Q Sbjct: 801 SGTSGYTQLGDVATFTLAPGPNQISRENGKRLVIVT-SNVRGRDIGSFVTEAQQKVQSIV 859 Query: 843 QLPPGFAVAWTGQSLQERLSAAQAPLLMALSMLVVFLVLAALYESWSIPLSVMLVVPLGL 902 ++P G+ ++W G Q + + + +++ L++L+VFL+L A++ + L V VP L Sbjct: 860 KVPTGYWISWGGTFEQLQSATDRLKIVVPLALLLVFLLLFAMFGNVKDGLLVFTGVPFAL 919 Query: 903 IGAVLAVILRDLPNDVFFKVGMITVIGLSAKNAILIVEFAKQLHTEGMGLVPAAIRAAVL 962 G + A+ LRD+P + VG I + G++ N ++++ F + L EG L A A+ Sbjct: 920 TGGIAALWLRDIPLSISAGVGFIALSGVAVLNGLVMISFIRSLREEGRTLDEAIHEGALT 979 Query: 963 RLRPILMTSLAFALGVVPLMLASGASAETQRAIGTGVFGGM 1003 RLRP+LMT+L +LG VP+ LA G AE QR + T V GG+ Sbjct: 980 RLRPVLMTALVASLGFVPMALAMGTGAEVQRPLATVVIGGI 1020 >gi|134093787|ref|YP_001098862.1| RND divalent metal cation efflux transporter [Herminiimonas arsenicoxydans] Length = 1063 Score = 254 bits (649), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 270/1055 (25%), Positives = 483/1055 (45%), Gaps = 95/1055 (9%) Query: 3 RFFIDRPIFAWVLALFIVLLGVIAMSQLPIARYPSVAPPSVSINATYPGATPQTMNDGVI 62 RF ID+ ++ + + LG+ +LPI P + V IN++ PG +P + Sbjct: 7 RFAIDQRWLIMLMTIGMAALGIYNYQKLPIDAVPDITNVQVQINSSAPGYSPLEAEQRIT 66 Query: 63 SLIERELSGVKNLLYFESSADTS--GSAQISVTFKPGTDPELAQVDVQNKLKAIEARLPQ 120 +E ++G L + E + S G +Q++V FK GTD A+ V +++ + +LP Sbjct: 67 FPVETVMAG---LPFLEQTRSISRYGLSQVTVIFKEGTDIYFARQMVNERIQEAKEKLPP 123 Query: 121 TVRQNGVTVESAASGFLLMVSLTSTDGR-------YDEVRLSDYLARNIVEELRRVDGVG 173 V + + S G + M ++ + G Y L + I +LR V GV Sbjct: 124 GVSPSMGPI-STGLGEIYMWTVEAKTGALKPDGTPYTPTDLREIQDWIIKPQLRNVPGVT 182 Query: 174 RVQLFGAE-QAMRIWIDPFKLNAFGLTVGDISAAISQQNAQIAPGRLGDSPTVPGQQIAV 232 + G + ++ P KL A GL++GD+ AA+ + N + G + G+Q + Sbjct: 183 EINTIGGNAKEFQVAPYPDKLIAHGLSLGDLVAALERNNNNVGAGYIEKR----GEQYLI 238 Query: 233 PLTVQGQLQSPAQFAAIVLKAKPDGSRVLLGDVARVELGAQSYAFSNREDGKPAGVAAVQ 292 GQ+ IV+ + G + + DVA V +G + + E+GK + V Sbjct: 239 --RAPGQVTDITDIGNIVISTR-QGVPLRIRDVADVVIGNELRTGAATENGKEVVLGTVF 295 Query: 293 LSPGANAVRTAAAIQARMDELRPSLPPGMHFSLPYNTAPFVKISIQKVVQTLIEAMVLVF 352 + G N+ AAA+ +M E+ +LP G+ Y+ V +I V + L+E +LV Sbjct: 296 MLIGENSRSVAAAVDKKMKEINLTLPKGIVADTVYDRTVLVDKAISTVKKNLMEGALLVI 355 Query: 353 LVMYLFLQNVRYTIIPAIVAPIALLGTLAVMLAVGYSVNVLTMFGMVLAIGIIVDDAIVV 412 V++LFL N+R II A+V P+A+L T M+ S N++++ L GII+D A+V+ Sbjct: 356 AVLFLFLGNIRAAIITAMVIPLAMLFTFTGMVGNKVSANLMSLGA--LDFGIIIDGAVVI 413 Query: 413 VEN-VERIMAQEGLGPREAT--------IKAMREITGAIVGITLVLTAVFIPMALAGGSV 463 VEN + R+ + L R T A +E ++ L++ V++P+ G Sbjct: 414 VENCIRRLSHAQALAGRALTRTERFHEVFAASKEARRPLIFGQLIIMVVYLPIFALSGVE 473 Query: 464 GVIYRQFALAMAVSILFSAFLALSLTPALCATLLQPVAPGHHDKRGFFGAFNRGFMRLTA 523 G ++ A + ++++ + L+L+ PA A L+ NR + Sbjct: 474 GKMFHPMAFTVVIALVGAMILSLTFIPAAVALLIGDKVSEKE---------NRLMVWSKR 524 Query: 524 RYESVLGRLVARGLRMMLVYAALSALLVLGLQALPSAFLPEEDQGYF-MTSFQLPADATA 582 RYE +L ++ ++ + + L L + + S F+P ++G + + ++P + Sbjct: 525 RYEPILDWVMLSKPLVLTIVGVVIVLSGLLMTRMGSEFIPSLNEGDIALHAMRIPGTSLT 584 Query: 583 ERTARAVDQFEQYLKTRQDIGANLSVLGFGFSGSGP---NAAMAFTELK---DWKLRHGA 636 + + E+ +K ++ + LG + P N A F LK +W Sbjct: 585 Q-AIEMQKELERNIKDFPEVSRVFAKLGTAEIATDPMPPNVADTFVILKPQSEWP--EPK 641 Query: 637 TAADEAHQAQLAMEAAGDGMVMSLLPPAIEELGNSSGFAMRLQDRANQGYDALKAAEA-- 694 + DE +AM+ A +S +P GN+ F +Q R N+ +++ A Sbjct: 642 RSKDEL---VIAMQEA-----VSKVP------GNNYEFTQPIQMRFNELISGVRSDVAVK 687 Query: 695 ----QLLALAAKSSKLSGVYSDGLPAGASIQLD-----------VDRHKAAALGVSFANI 739 + A+ + ++S V S +P A ++++ +DR K A LGV+ ++ Sbjct: 688 VFGDDMDAMNVTADQISDVLSS-VPGAADVKVEQTTGLPMLTVKIDREKVARLGVNVGDV 746 Query: 740 SDTLSAAMGSFYVNDFPNQGRMQQVILQARADARMQIEDVMKLYVR------NQSG--GM 791 + LS A+G + ++++ R IE + K+ +R Q+G G Sbjct: 747 QEALSIAVGGREAGMLFEGDKRFDILVRLPDSVRNDIESIKKIPIRLPVLEGTQAGTLGY 806 Query: 792 VPLAELVKASWRVVPTQLQRYQGFPAVRISGSAAPGVASGEAMAEMERLAQ---QLPPGF 848 L ++ + P Q+ R G V ++ + G G + E ++ Q ++P G+ Sbjct: 807 TQLGDVATFTLAPGPNQISRENGKRLVIVTANVR-GRDIGSFVNEAQQRVQGIVKVPTGY 865 Query: 849 AVAWTGQSLQERLSAAQAPLLMALSMLVVFLVLAALYESWSIPLSVMLVVPLGLIGAVLA 908 + W G Q + + + +++ LS+L+VFL+L A++ + L V VP L G + A Sbjct: 866 WITWGGTFEQLQSATDRLKIVVPLSLLLVFLLLFAMFGNVKDGLLVFTGVPFALTGGIAA 925 Query: 909 VILRDLPNDVFFKVGMITVIGLSAKNAILIVEFAKQLHTEGMGLVPAAIRAAVLRLRPIL 968 + LRD+P + VG I + G++ N ++++ F + L EG L A A+ RLRP+L Sbjct: 926 LWLRDIPLSISAGVGFIALSGVAVLNGLVMISFIRSLREEGRSLDEAIHEGALTRLRPVL 985 Query: 969 MTSLAFALGVVPLMLASGASAETQRAIGTGVFGGM 1003 MT+L +LG VP+ LA G AE QR + T V GG+ Sbjct: 986 MTALVASLGFVPMALAMGTGAEVQRPLATVVIGGI 1020 Database: BlastDatabases/690/690 Posted date: Apr 9, 2011 4:48 AM Number of letters in database: 1,000,347 Number of sequences in database: 3295 Lambda K H 0.322 0.136 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3295 Number of Hits to DB: 1,681,578 Number of extensions: 64160 Number of successful extensions: 370 Number of sequences better than 1.0e-08: 10 Number of HSP's gapped: 293 Number of HSP's successfully gapped: 12 Length of query: 1033 Length of database: 1,000,347 Length adjustment: 91 Effective length of query: 942 Effective length of database: 700,502 Effective search space: 659872884 Effective search space used: 659872884 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 134 (56.2 bits)