BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3820.p
         (604 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134093484|ref|YP_001098559.1| metallopeptidase [Herminiimonas...   825   0.0  

>gi|134093484|ref|YP_001098559.1| metallopeptidase [Herminiimonas
           arsenicoxydans]
          Length = 598

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/592 (68%), Positives = 477/592 (80%), Gaps = 3/592 (0%)

Query: 7   IRYSITSLDPASHLYDITVTVDTPAADGQVFSLPAWIPGSYMIREFGKNIVTLRGESNGR 66
           I Y+I   D A+HLY +TVTV+ P   GQ FSLPAWIPGSYM+REF KNIV +  ES+G+
Sbjct: 5   IHYTIVPKDLAAHLYAVTVTVNQPDPIGQCFSLPAWIPGSYMMREFAKNIVQISAESDGK 64

Query: 67  KVAVKKRDKHTWQAAPCKGALTLHYQVYAWDLSVRTAHLDRTHGFFNGTSVFLAAHGFED 126
           K+ + K DKHTW A  C+G LT+ Y+VYAWDLSVRTAHLD+THGFFNG+SVFL     ED
Sbjct: 65  KIGLSKLDKHTWIADECEGTLTVRYEVYAWDLSVRTAHLDQTHGFFNGSSVFLRVEDRED 124

Query: 127 GPHVVDIRRPAGEDFKRWRVATAMSELKAKRYGFGTYVAQNYDELIDHPVELGDFALASF 186
             H+VDI++P G D+ +WRVATAM +L A+RYGFGTY+A NYDELIDHPVELG FALA+F
Sbjct: 125 SVHIVDIQKPQGSDYDKWRVATAMRQLDARRYGFGTYIASNYDELIDHPVELGTFALATF 184

Query: 187 QAHGVPHDVVITGRVPNLDLARLCDDLKKICEAQIAFFEPRSKRAPMDRYVFMTLAVGDG 246
           +AHGV HDVV+TGRVPNLDL RL  DL+KICEAQIAFFEPRSKRAP+DRYVFMT+ VGDG
Sbjct: 185 KAHGVQHDVVLTGRVPNLDLLRLTTDLQKICEAQIAFFEPRSKRAPVDRYVFMTMVVGDG 244

Query: 247 YGGLEHRASTALICARADLPVKGKPEQSDGYRTYLGLCSHEYFHTWNVKRIKPAVFAPYD 306
           YGGLEHRASTALIC+RADLPVKG+PE SDGYRT+LGLCSHEYFHTWNVKRIKPA F PYD
Sbjct: 245 YGGLEHRASTALICSRADLPVKGQPEMSDGYRTFLGLCSHEYFHTWNVKRIKPAAFVPYD 304

Query: 307 LRQENYTSLLWLFEGFTSYYDDLFLVRTGVIDTEQYLKLVGKTITGVLRGTGRKKQSVAE 366
           L+ E YTSLLWLFEGFTSYYDDL L+R+GVID   YLKLV KT+  VLRG+GR+KQSVAE
Sbjct: 305 LKMEGYTSLLWLFEGFTSYYDDLMLLRSGVIDAPAYLKLVAKTVNSVLRGSGRRKQSVAE 364

Query: 367 SSFDAWVKYYRQDENASNAIVSYYTKGSLVALGLDLSICEQTRGRRSLDDVMRGLWTRYG 426
           SSFDAW+KYYRQDENASNA+VSYYTKGSLVAL LDL+I  +T+G++SLDDVM  LW +YG
Sbjct: 365 SSFDAWIKYYRQDENASNAVVSYYTKGSLVALALDLTIRAETKGKKSLDDVMLALWQQYG 424

Query: 427 RDFYH-GKQ-QGVAEDEILAVMEELSGADLKRFYDRHIRGTEDVPLEDLLPAFGVAYDAC 484
           RDFY  GK+ +GV + E+ A+ + ++G  L+R  DR +RGTED+PL  LL  FG+A++  
Sbjct: 425 RDFYQDGKEGRGVNDAEVDALFDSVTGLKLQRVLDRWVRGTEDIPLVKLLAPFGIAFND- 483

Query: 485 LPADAKPWLGARIGKEGGDAKLAAVYEGGPAMQAGLSAGDKLVAIDGLRVPASGADGLLA 544
              + KP LG R  ++G D K+AA+YE G A +AGLSAGD LVAIDGLRV A+  D LL 
Sbjct: 484 ERKNGKPGLGMRTTRDGNDCKIAAIYEAGAAHRAGLSAGDVLVAIDGLRVNANNLDVLLG 543

Query: 545 RYRLNDTVRIHAFRRDELMEFSVRLKADSAPQVSLSAMGKPVAVVRRRLAWL 596
           RYR+ D + IHAFRRDEL+ F+  + A  AP VSL    KPVA VR R AWL
Sbjct: 544 RYRIGDKIGIHAFRRDELLIFNATVAAPDAPAVSLVTEDKPVAAVRLRQAWL 595


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.321    0.138    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 1,283,857
Number of extensions: 57327
Number of successful extensions: 138
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 136
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1,000,347
Length adjustment: 87
Effective length of query: 517
Effective length of database: 713,682
Effective search space: 368973594
Effective search space used: 368973594
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)