BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3808.p
         (291 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096022|ref|YP_001101097.1| 7-cyano-7-deazaguanine reductas...   397   e-112

>gi|134096022|ref|YP_001101097.1| 7-cyano-7-deazaguanine reductase
           [Herminiimonas arsenicoxydans]
          Length = 279

 Score =  397 bits (1019), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/281 (68%), Positives = 216/281 (76%), Gaps = 4/281 (1%)

Query: 11  TGHSPESSPLGKSSPYPTHYDPSLLFPIPRAPKRAELQISGTLPFFGADFWTAYEISWLN 70
           T   P+ SPLGK + Y  HYDPSLLF IPR  KR E+ +SGTLPFFG D W AYEISWLN
Sbjct: 3   TPFKPDGSPLGKPTAYEAHYDPSLLFSIPRQYKRDEIGLSGTLPFFGVDIWNAYEISWLN 62

Query: 71  LRGKPQIAIASFMVPADSPNIIESKSFKLYLNSFNQERLESSAQLLDKLRTDLSAAAGAN 130
           +RGKPQ+A+A   VPADSPNI+ESKSFKLYLNS NQ +L  +  LL+ LR DLS+  GA 
Sbjct: 63  MRGKPQVAMARVTVPADSPNIVESKSFKLYLNSLNQTKLGGTEALLELLREDLSSGFGAP 122

Query: 131 VQVSLTESAQFGQVQFGELSGLLLDRLDVDIEPVSGNPHPDGSQLRANTDEATVEETLVS 190
           VQV+LT    F +V  GEL+GLLLDRLD+++   S    PD + LRA  DE  VEETLVS
Sbjct: 123 VQVTLTLPENFARVPMGELNGLLLDRLDIEVHEYS----PDPTLLRAARDEPVVEETLVS 178

Query: 191 HLLKSNCPVTSQPDWGSVQIHYVGAPIDQERLLKYIIGFREHNEFHEQCVERIFTDILRH 250
           HLLKSNC VT QPDW SVQI YVG  IDQ  LL+Y+IGFREHNEFHEQCVERIF DI+R 
Sbjct: 179 HLLKSNCLVTGQPDWASVQIQYVGGAIDQAGLLQYLIGFREHNEFHEQCVERIFMDIMRQ 238

Query: 251 CKPQKLAVYARYTRRGGLDINPWRSNFSSAKPPSQLRNARQ 291
           CKPQKLAVYARYTRRGGLDINPWRSNFS+   PS  RNARQ
Sbjct: 239 CKPQKLAVYARYTRRGGLDINPWRSNFSTGTAPSNARNARQ 279


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.316    0.133    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 576,500
Number of extensions: 23810
Number of successful extensions: 50
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 49
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 210
Effective length of database: 733,452
Effective search space: 154024920
Effective search space used: 154024920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 128 (53.9 bits)