BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3799.p
         (524 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096013|ref|YP_001101088.1| 2-octaprenylphenol hydroxylase ...   845   0.0  

>gi|134096013|ref|YP_001101088.1| 2-octaprenylphenol hydroxylase
           [Herminiimonas arsenicoxydans]
          Length = 520

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/514 (79%), Positives = 455/514 (88%), Gaps = 2/514 (0%)

Query: 1   MLLRSMRLFKIIRVAILYGLDEIIAAEFAPPRIARIINRVFFWRDLSAPRGERLRRALED 60
           M+L+ +R+ KI+RVAI YGLD+I  +    PR  +++N++ FWRDLS PRG RLRRALED
Sbjct: 1   MILKFLRVLKILRVAIRYGLDDIAMSGLRIPRTTKLLNQIMFWRDLSEPRGVRLRRALED 60

Query: 61  LGPIFIKFGQVLSTRRDLMPPDIANELTLLQDRVPPFSSELAIKQIEKSLGAHPDQLFAS 120
           LGPIF+KFGQVLSTRRDLMP DIA+EL  LQDRVPPFSSELAI QI KSLGAHPD LFA 
Sbjct: 61  LGPIFVKFGQVLSTRRDLMPIDIADELARLQDRVPPFSSELAIAQIIKSLGAHPDVLFAH 120

Query: 121 FERTPVASASIAQVHFATLKDGKQVAVKVLRPGMRDIIDHDIGLMHVAADWLERLWADGR 180
           FE  PVASASIAQVHFA LK+G+ VAVKVLRPG+R  ID D+ LMH+ A  +E+LWADG+
Sbjct: 121 FEAEPVASASIAQVHFARLKNGRDVAVKVLRPGVRKSIDDDVALMHIVAGLVEKLWADGK 180

Query: 181 RLKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMYWDYCSPSVIVMER 240
           RLK KEVV EFDKYLHDELDLMREAAN SQLRRNFA S LL+VPEM+WDYCS SVIVMER
Sbjct: 181 RLKPKEVVAEFDKYLHDELDLMREAANGSQLRRNFAASKLLVVPEMFWDYCSTSVIVMER 240

Query: 241 MYGIPISQTERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPESFGR 300
           M GIPISQT+RL A G+DL KLSRDGVEIFFTQVFRDGFFHADMHPGNI VSVAPE+FGR
Sbjct: 241 MIGIPISQTDRLIAAGIDLKKLSRDGVEIFFTQVFRDGFFHADMHPGNIQVSVAPETFGR 300

Query: 301 YIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKDTRVDELEAAVRA 360
           YIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPK+TRVDELE+AVRA
Sbjct: 301 YIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELESAVRA 360

Query: 361 CCEPIFDRPLKDISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDL 420
           CCEPIFDRPL +ISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDP+LDL
Sbjct: 361 CCEPIFDRPLSEISFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDL 420

Query: 421 WKTAKPYLERWMSEQIGWRGFIEQLKVEVPRYSRLLPELPRLAHQALTRYTEGEGQPQNT 480
           WKTAKPYLE WM+EQ+GWRGF+E LK E PRYS+LLP+LPRLAHQALT+ +  E +  NT
Sbjct: 421 WKTAKPYLENWMNEQVGWRGFLENLKAEAPRYSKLLPQLPRLAHQALTQAS--EPRQDNT 478

Query: 481 ELIRKLLAEQRRTNMLLGVIVYFGGGLIGGIIVV 514
           ELIR+LL EQ+RTN+LLGV VYFGGGL+ G I+ 
Sbjct: 479 ELIRRLLEEQKRTNLLLGVAVYFGGGLVAGGILT 512


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.326    0.142    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 948,157
Number of extensions: 39294
Number of successful extensions: 110
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 109
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 1,000,347
Length adjustment: 86
Effective length of query: 438
Effective length of database: 716,977
Effective search space: 314035926
Effective search space used: 314035926
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 131 (55.1 bits)