BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3785.p
         (310 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134093499|ref|YP_001098574.1| putative gluconolactonase with ...   368   e-103

>gi|134093499|ref|YP_001098574.1| putative gluconolactonase with
           senescence marker [Herminiimonas arsenicoxydans]
          Length = 296

 Score =  368 bits (944), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 174/295 (58%), Positives = 217/295 (73%), Gaps = 1/295 (0%)

Query: 14  LSADTITAISPEPMLLGESPLWHAEEGALYWIDIPGKAVHKLVLETQQHQRWDMPEEPGS 73
           +S + I AI P  M LGE PLWHA++ ALYWIDI G A+H+       H  W MP EPG 
Sbjct: 1   MSMENIQAILPTRMQLGECPLWHAQQAALYWIDIDGCAIHRFHPAHGAHHVWTMPSEPGC 60

Query: 74  IVKHAQGGLVVALRTGMFHLNTGNGALSALLAAPYDTSRIRFNDGRCDASGRFWCGTIYE 133
           I  +A GGL+VALR+G+  L+T NG L+ + AAPYD +  RFNDGRCDA+GR W G+IYE
Sbjct: 61  IAINASGGLIVALRSGLALLDTDNGQLTTIAAAPYDPASTRFNDGRCDAAGRLWVGSIYE 120

Query: 134 PRDREGGTLYCFERNALRDAHHAVTTSNGLAFSVDQRLMYHANTPAHRINVYDYDLATGQ 193
           PRD     LYC ER  +RD+    T SNG+AFS D + +YHA+T +HRI+ Y+YD+ATG 
Sbjct: 121 PRDHPHAALYCIERGLIRDSGKRATVSNGVAFSPDNKTLYHADTTSHRISAYEYDVATGA 180

Query: 194 TSNCRLLRQFDSDKNAPDYGGRPDGAAVDSEGAYWCAMFEGGRVLRLSPAGEILQEIRLP 253
            S  RLL+QF +DK   +YGGRPDGAAVDSEGAYWCAM+EGG++LRLSP GE+L+EI LP
Sbjct: 181 ISGTRLLKQFSTDK-LNNYGGRPDGAAVDSEGAYWCAMYEGGKILRLSPDGEVLREIPLP 239

Query: 254 ARCPTMVAFGGTDLRTLFITTGRNGRSQAELAQYPFSGHVLAIRVAVAGRLEYSY 308
            RCPTM+AFGG DLRTL+ITT    R  AEL Q+P SG VL++R+ VAG +E++Y
Sbjct: 240 VRCPTMLAFGGDDLRTLYITTVSKNRPAAELKQFPLSGCVLSLRIDVAGLVEHAY 294


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.135    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 637,436
Number of extensions: 28501
Number of successful extensions: 55
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 54
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 229
Effective length of database: 733,452
Effective search space: 167960508
Effective search space used: 167960508
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)