BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3691.p
         (593 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094836|ref|YP_001099911.1| potassium-transporting ATPase s...   775   0.0  

>gi|134094836|ref|YP_001099911.1| potassium-transporting ATPase
           subunit A [Herminiimonas arsenicoxydans]
          Length = 601

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/600 (65%), Positives = 476/600 (79%), Gaps = 8/600 (1%)

Query: 1   MDSNNYYQLGLYLVVLLLLSLPLGWYMARVMEGKS-RVNRLFGGIERIFYRISGIDGEQE 59
           M S +   L  +L VLL L+ PLG +MA+V +G + R       +E   YR++G+D +  
Sbjct: 1   MTSQSIMLLVAFLGVLLALAYPLGLFMAKVGDGTAIRGLGWLLKMENALYRLAGLDTQSA 60

Query: 60  MNWKQYAIAVVLFNFIGVVVVYLLQRVQLWLPLNPQAFANVSPDSSFNTALSFVTNTDWQ 119
           M+WK YAIA+++FN +G + VY +QR+Q WLPLNPQAF NVSPDSSFNTA+SFV+NT+WQ
Sbjct: 61  MSWKSYAIALLVFNTLGALFVYAVQRLQAWLPLNPQAFGNVSPDSSFNTAVSFVSNTNWQ 120

Query: 120 GYTGEATMSYLTQMAALAVQNFLSAATGIAIAFALIRGFARHSSKGIGNFWVDMTRSILY 179
           GY GE+TMSYLTQM AL  QNF SAATGIA+AFALIRGF+  S+K IGNFWVD+TRS LY
Sbjct: 121 GYGGESTMSYLTQMLALTGQNFFSAATGIAVAFALIRGFSSRSAKSIGNFWVDLTRSTLY 180

Query: 180 VLLPLSVVFALVLVQQGSIQNFHAYQDVKTLEVTNYTIPKLDAAGQPLKDAKGEPLTEAQ 239
           +LLPL++V ++ L+ QG IQNF AYQDV  ++   Y   K  A GQP+ DA+G+P+ E  
Sbjct: 181 ILLPLAIVVSVALMGQGVIQNFSAYQDVALVDPVTYQQAKTTADGQPVVDAEGKPVMETL 240

Query: 240 STDKQTLPMGPVASQEAIKMIGTNGGGFFNANSAHPYENPTPLSNFLQMLAILIIPAALC 299
           +   QT+ MGPVASQEAIKM+GTNGGGFFNANSAHPYENPT  SNF++MLAI +IPA LC
Sbjct: 241 TAKMQTIAMGPVASQEAIKMLGTNGGGFFNANSAHPYENPTVFSNFIEMLAIFLIPAGLC 300

Query: 300 TSFGVLVGDRRQGWAILASMTLLFVVMTLVLMYSESQPNPMLASLHAS-------GPGMM 352
            +FG +VGD RQGWA+L +MTL+FVVMT ++M SE   +P + +L            G M
Sbjct: 301 FTFGRMVGDMRQGWAVLGAMTLIFVVMTSIVMTSEQSAHPAMQALGVDQTTTALQSGGNM 360

Query: 353 EGKETRFGIPASALFASITTAASCGAVNAMHDSLSPLGGLVPMLQMQLGEVVFGGVGSGL 412
           EGKETRFGI ASALF ++TTAASCGAVN MHDSL P+GG VP++ MQ GEVVFGGVG+GL
Sbjct: 361 EGKETRFGISASALFTAVTTAASCGAVNNMHDSLMPMGGFVPLVLMQFGEVVFGGVGTGL 420

Query: 413 YGMLIFAVLAVFIAGLMIGRTPEYLGKKIGVFDMKMMSIAILMTPALVLIFTALSVMVEG 472
           YGMLIFA+L+VFIAGLMIGRTPEYLGKKI  ++MKM SIAIL+TP LVL+ TA++V+VE 
Sbjct: 421 YGMLIFAILSVFIAGLMIGRTPEYLGKKIQSYEMKMASIAILVTPTLVLVGTAIAVLVES 480

Query: 473 GLAGIANPGAHGFSEILYAFSSAANNNGSAFAGLSANTPYYNITTGLCTWLGRFGIIVPV 532
           G  GIANPGAHGFSEILYAF+SAANNNGSAFAGLSANTP+YN    +  W GRF +IVP+
Sbjct: 481 GKVGIANPGAHGFSEILYAFTSAANNNGSAFAGLSANTPFYNTMLAIAMWFGRFAMIVPI 540

Query: 533 LAMAGSLAAKKRLAATSGTLPTHGPLFVALLIGAVILVGALTYVPALALGPVVEHLQMMA 592
           LA+AGSLA K+RLAA +GT+PTHGPLFVALL+G V+LVG L YVPALALGP+VEHLQ+ +
Sbjct: 541 LAIAGSLACKQRLAANAGTMPTHGPLFVALLVGVVVLVGVLNYVPALALGPIVEHLQLFS 600


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.323    0.137    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 999,821
Number of extensions: 38259
Number of successful extensions: 139
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 138
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 1,000,347
Length adjustment: 87
Effective length of query: 506
Effective length of database: 713,682
Effective search space: 361123092
Effective search space used: 361123092
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 131 (55.1 bits)