BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3650.p
         (187 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134093757|ref|YP_001098832.1| hypothetical protein HEAR0495 [...   221   3e-59

>gi|134093757|ref|YP_001098832.1| hypothetical protein HEAR0495
           [Herminiimonas arsenicoxydans]
          Length = 188

 Score =  221 bits (562), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 107/169 (63%), Positives = 132/169 (78%), Gaps = 1/169 (0%)

Query: 19  DIVFYYVGYFSQTIIAAMAEAVKLRAEHTGALAQTRRKLFSSFIEMAQNIVHYSADLHEK 78
           +++FYY+GYFSQ IIAAMA++VK R E+ GA + TRRKLFSSFIEM QNI+HYSA+  E 
Sbjct: 21  NVIFYYMGYFSQNIIAAMADSVKTRVEYIGAASPTRRKLFSSFIEMTQNIIHYSAESIET 80

Query: 79  EGKVTEPPMRHGAVFITQTDGHYFLHCANPVDADMADKLRIKLEHLRSLTNDEIKAAYKE 138
            GK T+  MR G+V I+  +  YFL C+N V A++AD LR KLEHLR+LTN+EI+  Y+E
Sbjct: 81  SGK-TDVEMRRGSVCISVENDRYFLKCSNLVHANIADHLREKLEHLRTLTNEEIRLEYQE 139

Query: 139 MLRSETPPDSKGAGLGFLTVARDASAPLDFEFSQPGADGEQTFYLRATI 187
            LR+ETP +SKGAGLGFLT+ARDAS PLDFEF   GADG   F L+ATI
Sbjct: 140 TLRAETPQESKGAGLGFLTMARDASEPLDFEFIPEGADGNMMFCLKATI 188


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.321    0.134    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 360,558
Number of extensions: 13535
Number of successful extensions: 36
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 1,000,347
Length adjustment: 76
Effective length of query: 111
Effective length of database: 749,927
Effective search space: 83241897
Effective search space used: 83241897
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 126 (53.1 bits)