BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3626.p
         (414 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095263|ref|YP_001100338.1| 3-oxoacyl-[acyl-carrier-protein...   202   3e-53
gi|134096036|ref|YP_001101111.1| 3-oxoacyl-(acyl carrier protein...   144   9e-36

>gi|134095263|ref|YP_001100338.1| 3-oxoacyl-[acyl-carrier-protein]
           synthase II [Herminiimonas arsenicoxydans]
          Length = 413

 Score =  202 bits (513), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/411 (33%), Positives = 202/411 (49%), Gaps = 7/411 (1%)

Query: 6   TERRVVVTGMAGISPIGTDWSSALAHLKTYTNAVQRMSGWDEYVGLHTRLGAPAVEFSLS 65
           ++RRVVVTG+  +SP+G + + A   L    + +  ++ +D      T        F++ 
Sbjct: 5   SKRRVVVTGLGCVSPVGNNVADAWNALLAGQSGIATITKFDA-TPFSTHFAGEVKNFNIE 63

Query: 66  ERYNRKTTRSMGRVALMATRASEWALADAGLLDHALLKSGQLGIAYGSSAGTPNAIADFA 125
           +    K  R M         A   A  D GL+           I      G P  I +  
Sbjct: 64  DYIPGKEARHMDTFIHYGVAAGMQAWQDCGLVVTEENAERIGVIVGSGIGGLP-LIENTH 122

Query: 126 MMFAEKNTRDINANTYLKMMAHTAPVNMGVFFGITGRIITTSSACTSGSQGIGYAYETIR 185
                +  R I+       + +    ++ + +G+ G  +   +ACT+G   IG A   I 
Sbjct: 123 AELVNRGPRRISPFFVPASIINMISGHLSIIYGLKGPNMAVVTACTTGLHSIGTAGRMIE 182

Query: 186 SGRQVAMVAGGSEE-LCATEAAVFDTLYATSVRNDTPQLTPSPFDRDRDGLVLGEGAGSL 244
            G    M+AGG+E  +       F +  A S RND P     P+D+DRDG VLGEGAG +
Sbjct: 183 YGDADVMIAGGAESTISPLGLGGFASARALSSRNDDPTTASRPWDKDRDGFVLGEGAGVM 242

Query: 245 ILEDLDHAQARGARIYAEIVGFGTNSDGAHVTNPNAATMQAAIQMALDDAALPASSIGYI 304
           +LE+ +HA+ARGA+IYAE+VGFG + D  H+T PN    + ++  AL  A + A  + Y+
Sbjct: 243 VLEEYEHAKARGAKIYAELVGFGMSGDAYHITAPNMDGPRRSMANALKSAEIAADQVQYL 302

Query: 305 NAHGTGTRQGDVAETQATARIFGTATP---ISSLKSYMGHTLGACGALEAWLSIEMMRHG 361
           NAHGT T  GD  ET A    FG       ++S KS  GH LG  G LE+  ++  + H 
Sbjct: 303 NAHGTSTPLGDKNETDAVKAAFGAHAKKLTVNSTKSMTGHLLGGAGGLESVFTVLALHHQ 362

Query: 362 WFAPTINLQQPDPECGELDYLTGSGRTLECEYVMSNNFAFGGINTSLIFKR 412
              PTIN+   DPEC +LDY   + R +  +Y M NNF FGG N +LIF +
Sbjct: 363 ISPPTINILNQDPEC-DLDYCANTAREMPMQYAMKNNFGFGGTNGTLIFGK 412


>gi|134096036|ref|YP_001101111.1| 3-oxoacyl-(acyl carrier protein)
           synthase I [Herminiimonas arsenicoxydans]
          Length = 396

 Score =  144 bits (362), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 134/257 (52%), Gaps = 13/257 (5%)

Query: 156 FFGITGRIITTSSACTSGSQGIGYAYETIRSGRQVAMVAGGSEELCATEAAVFDTLYATS 215
             G+TG  +T SSAC+S ++  G A   I +G   A V GG + LC T      TLY  +
Sbjct: 147 LLGLTGPALTVSSACSSSAKVFGNAARMIEAGLIDAAVVGGVDSLCLT------TLYGFN 200

Query: 216 VRNDTPQLTPSPFDRDRDGLVLGEGAGSLILEDLDHAQARGARIYAEIVGFGTNSDGAHV 275
                  L   P+   R+G+ + EGA  ++L     A A G  +   + G G +SD  H+
Sbjct: 201 SLQLLAPLPAQPYGEGRNGISIAEGAAFVLLTKPASAPAAGTIL---LHGVGESSDAHHM 257

Query: 276 TNPNAATM--QAAIQMALDDAALPASSIGYINAHGTGTRQGDVAETQATARIFGTATPIS 333
           ++P+   +  Q A+  AL  A + A  IGYIN HGT T   D AE +A   +FG  T  S
Sbjct: 258 SSPHPEGLGAQMAMYAALQAAGIQAEQIGYINLHGTATPSNDAAEGKAVHAVFGNTTACS 317

Query: 334 SLKSYMGHTLGACGALEAWLSIEMMRHGWFAPTINLQQPDPECGELDYLTGSGRTLECEY 393
           S K   GHTLGA G +EA + +  M+HG     IN ++ DP   ++DY+  S R+    Y
Sbjct: 318 STKGATGHTLGAAGGVEAIICVMAMQHGVMPAGINTKKVDPGL-DVDYVL-SNRSEPIHY 375

Query: 394 VMSNNFAFGGINTSLIF 410
            ++N+F FGG N SL+ 
Sbjct: 376 AVNNSFGFGGSNCSLVL 392


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.317    0.131    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 784,274
Number of extensions: 31941
Number of successful extensions: 105
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 96
Number of HSP's successfully gapped: 2
Length of query: 414
Length of database: 1,000,347
Length adjustment: 84
Effective length of query: 330
Effective length of database: 723,567
Effective search space: 238777110
Effective search space used: 238777110
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)