BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3623.p
         (399 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096036|ref|YP_001101111.1| 3-oxoacyl-(acyl carrier protein...   268   5e-73
gi|134095263|ref|YP_001100338.1| 3-oxoacyl-[acyl-carrier-protein...   101   8e-23

>gi|134096036|ref|YP_001101111.1| 3-oxoacyl-(acyl carrier protein)
           synthase I [Herminiimonas arsenicoxydans]
          Length = 396

 Score =  268 bits (684), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 170/358 (47%), Positives = 216/358 (60%), Gaps = 24/358 (6%)

Query: 48  LGAVA--DDTVLPDDSHLPLRE-RSRNNRLALAALQ--GIRPQVDAAIARYGAQRLAIVL 102
           +G VA  DD VLP      LRE   RNNRLA  ALQ  G    V AAIA+YGA R+ + L
Sbjct: 47  IGEVAGVDDVVLP----AVLREFDCRNNRLAHLALQQDGFVVAVQAAIAQYGADRVGLFL 102

Query: 103 GTSTSGIAEGETAFSQRAASGNFPAGYHYGQ-QELGSPAIALQLTLGTSGPAYVQSSACA 161
           GTSTSGI + E A+ +R ++G  PA +HY Q     S A  +   LG +GPA   SSAC+
Sbjct: 103 GTSTSGILQTELAYRERQSNGALPADFHYTQTHNTYSVAAYVSALLGLTGPALTVSSACS 162

Query: 162 SSGKAIASAARLLNMGLCDAVLCGGVDTLCEFTIAGFTALESVSAQRCNPLSLHRQGINI 221
           SS K   +AAR++  GL DA + GGVD+LC  T+ GF +L+ ++     P    R GI+I
Sbjct: 163 SSAKVFGNAARMIEAGLIDAAVVGGVDSLCLTTLYGFNSLQLLAPLPAQPYGEGRNGISI 222

Query: 222 GEGAALFLLTREPAS------VELSGWGESSDAYHISAPDPEGKGAQLAIHEALRRAGLE 275
            EGAA  LLT+ PAS      + L G GESSDA+H+S+P PEG GAQ+A++ AL+ AG++
Sbjct: 223 AEGAAFVLLTK-PASAPAAGTILLHGVGESSDAHHMSSPHPEGLGAQMAMYAALQAAGIQ 281

Query: 276 AAQIDYINLHGTATAQNDAMESHVVQTLFGLNVPVSSTKPFTGHTLGAASAIEAGLCWLL 335
           A QI YINLHGTAT  NDA E   V  +FG     SSTK  TGHTLGAA  +EA +C + 
Sbjct: 282 AEQIGYINLHGTATPSNDAAEGKAVHAVFGNTTACSSTKGATGHTLGAAGGVEAIICVMA 341

Query: 336 MQDDNPDGQLPPHLWDGVADPALPALQPVVLGQRLGRPLRHVLSNSFAFGGSNVALVF 393
           MQ     G +P  +     DP L      VL  R   P+ + ++NSF FGGSN +LV 
Sbjct: 342 MQ----HGVMPAGINTKKVDPGLDV--DYVLSNR-SEPIHYAVNNSFGFGGSNCSLVL 392


>gi|134095263|ref|YP_001100338.1| 3-oxoacyl-[acyl-carrier-protein]
           synthase II [Herminiimonas arsenicoxydans]
          Length = 413

 Score =  101 bits (251), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 134/272 (49%), Gaps = 28/272 (10%)

Query: 143 LQLTLGTSGPAYVQSSACASSGKAIASAARLLNMGLCDAVLCGGVD-TLCEFTIAGFTAL 201
           L +  G  GP     +AC +   +I +A R++  G  D ++ GG + T+    + GF + 
Sbjct: 150 LSIIYGLKGPNMAVVTACTTGLHSIGTAGRMIEYGDADVMIAGGAESTISPLGLGGFASA 209

Query: 202 ESVSAQRCNPLS------LHRQGINIGEGAALFLLTREPAS--------VELSGWGESSD 247
            ++S++  +P +        R G  +GEGA + +L     +         EL G+G S D
Sbjct: 210 RALSSRNDDPTTASRPWDKDRDGFVLGEGAGVMVLEEYEHAKARGAKIYAELVGFGMSGD 269

Query: 248 AYHISAPDPEGKGAQLAIHEALRRAGLEAAQIDYINLHGTATAQNDAMESHVVQTLFGLN 307
           AYHI+AP+ +G    +A   AL+ A + A Q+ Y+N HGT+T   D  E+  V+  FG +
Sbjct: 270 AYHITAPNMDGPRRSMA--NALKSAEIAADQVQYLNAHGTSTPLGDKNETDAVKAAFGAH 327

Query: 308 ---VPVSSTKPFTGHTLGAASAIEAGLCWLLMQDDNPDGQL-PPHLWDGVADPALPALQP 363
              + V+STK  TGH LG A  +E+    L +       Q+ PP +     DP       
Sbjct: 328 AKKLTVNSTKSMTGHLLGGAGGLESVFTVLALHH-----QISPPTINILNQDPECDLDYC 382

Query: 364 VVLGQRLGRPLRHVLSNSFAFGGSNVALVFSR 395
               + +  P+++ + N+F FGG+N  L+F +
Sbjct: 383 ANTAREM--PMQYAMKNNFGFGGTNGTLIFGK 412


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.318    0.133    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 791,231
Number of extensions: 34187
Number of successful extensions: 131
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 123
Number of HSP's successfully gapped: 2
Length of query: 399
Length of database: 1,000,347
Length adjustment: 84
Effective length of query: 315
Effective length of database: 723,567
Effective search space: 227923605
Effective search space used: 227923605
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)