BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3617.p
         (320 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096039|ref|YP_001101114.1| acyltransferase [Herminiimonas ...   134   5e-33

>gi|134096039|ref|YP_001101114.1| acyltransferase [Herminiimonas
           arsenicoxydans]
          Length = 303

 Score =  134 bits (338), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 152/311 (48%), Gaps = 15/311 (4%)

Query: 7   ARHWAQINEVSFVAGMRLLFAVYRLLGRLPFRLMLYPVLCWYIAANGRARRSSREFLAQV 66
           ++ W +  E   +  +R +  +  LLGR   RL+LYP+  ++      +RR+S  +LA+V
Sbjct: 2   SQDWTEQKERGSLGLLRFMVKLANLLGRRVTRLLLYPIALYFFLVVADSRRASAAYLARV 61

Query: 67  RNYAPALPLRTGLVGVFLHFAAFGESLLDKMLLWGGLFPIKNVHLLGSQHISEAIAAGTG 126
                    +     VF HF  F   LLD++          ++ ++   +  E   A  G
Sbjct: 62  ------FGRKAHWYEVFHHFHVFAGVLLDRVYFLQNRVEYFDIEVMQDAYDQETAEARAG 115

Query: 127 GL-IICTHLGNLELCRVIGRQHPALKLTVLVHTRHAQAFNQMLAQLDPGSQLNLLQVTEM 185
           G+ ++  H+G+ E+ R++ R    LKL +L++  +A+    ++A ++P +Q  ++ +  +
Sbjct: 116 GVFVMGAHMGSFEVVRLVSRAKAELKLVLLMYEENARKIGALMAAINPQAQQEIVPLGNL 175

Query: 186 SPATAMMLAEKVAQGEFVVIAGDRVPVSPQPRVAQASFLGRRAPFPIGPYVLAALLQCPV 245
           S    + + +++A+G  + I  DR       R   A+FLG  A F +GP+ +AA+++ PV
Sbjct: 176 S--AMLTVRDRLAEGGIIGILADRTL--SHERNFPATFLGETAYFAVGPFRMAAMMRKPV 231

Query: 246 YLMFSR-RTASGAEVAFE---TFRQQITLPRKQREQVLAELAGDYAARLQAHCLQAPYQW 301
           +LM    R  +  E+  E    F       R+   Q +      Y ARL+     APY W
Sbjct: 232 FLMVGMYRGGNRYEIHIEKIADFSDDEHGERRNSPQAIDAAIAKYVARLEHFARLAPYNW 291

Query: 302 FNFYDFWADSA 312
           FNFYDFW  +A
Sbjct: 292 FNFYDFWQGNA 302


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.327    0.138    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 604,405
Number of extensions: 24519
Number of successful extensions: 92
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 88
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 1,000,347
Length adjustment: 82
Effective length of query: 238
Effective length of database: 730,157
Effective search space: 173777366
Effective search space used: 173777366
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 129 (54.3 bits)