BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3465.p
         (221 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134093813|ref|YP_001098888.1| nicotinic acid mononucleotide a...   313   5e-87

>gi|134093813|ref|YP_001098888.1| nicotinic acid mononucleotide
           adenylyltransferase [Herminiimonas arsenicoxydans]
          Length = 219

 Score =  313 bits (801), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 150/213 (70%), Positives = 170/213 (79%)

Query: 8   RCIAVLGGSFDPVHNGHVRLAEHFVQLLQPDELRVIPTGNPWQKHGLQAAPADRVEMVRL 67
           RCIA+LGGSFDPVHNGHV LA++FV LL+PDELRVIP GNPWQKHGLQA+  DR+ MVR 
Sbjct: 6   RCIALLGGSFDPVHNGHVALADYFVALLKPDELRVIPAGNPWQKHGLQASGQDRMAMVRS 65

Query: 68  AFDRQQVPVVIDEQEIRRASATYTIDTLRALRAELGPAVSIVFLMGADQLQHLDTWQHWQ 127
           AF  Q+V V ID+QEI R SATYTIDTLRA+R ELGP  SIVFLMGADQLQHL+TWQ WQ
Sbjct: 66  AFSTQKVTVNIDQQEILRPSATYTIDTLRAIRQELGPHASIVFLMGADQLQHLNTWQEWQ 125

Query: 128 ELFDLAHLCAASRPGFELADAHVPPAVREEFKRRNAAPQDIRSTPHGYGYLALGLAVDIS 187
            +FD AH+CAASRPGF +  AH+P  V +EF RR   P+ IR+TP G  YLA  LAVDIS
Sbjct: 126 HMFDYAHICAASRPGFAMDAAHIPTEVAQEFTRRTGTPEQIRTTPQGLAYLAPNLAVDIS 185

Query: 188 STEIRAQLQRGTRPDSLIPGRVLDYIEQQHLYR 220
           +T IRA LQRG RP S +P  VLDYIEQ HLY+
Sbjct: 186 ATAIRAALQRGERPTSQLPLGVLDYIEQHHLYK 218


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.323    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 457,253
Number of extensions: 18585
Number of successful extensions: 41
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 41
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 1,000,347
Length adjustment: 78
Effective length of query: 143
Effective length of database: 743,337
Effective search space: 106297191
Effective search space used: 106297191
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 127 (53.5 bits)