BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3430.p
         (168 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094009|ref|YP_001099084.1| hypothetical protein HEAR0763 [...   181   2e-47

>gi|134094009|ref|YP_001099084.1| hypothetical protein HEAR0763
           [Herminiimonas arsenicoxydans]
          Length = 167

 Score =  181 bits (459), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/166 (65%), Positives = 137/166 (82%)

Query: 1   MKQIMGIFGVVHGVIAVLFALAALALIAIAARMGFEALTEGMGLAQAQALIEAIGILAAA 60
           MK    +F ++HG++A+ FALAAL LIAIA R+G++ L  G+  A AQ +IEA+G+LAAA
Sbjct: 1   MKLATNVFRLMHGLMAIFFALAALILIAIAVRIGWQGLMGGLDQAAAQTIIEAVGLLAAA 60

Query: 61  VVAFQIAETITEEEVVRDANISAPTRVRRFLSRFFVVVIVALAIEGLVMTFRAVHEEATD 120
           VVA QIAETI EEE+VRDA+ISAPTRVRRFLSRFFVV+IVALAIEGLV TF+A+HE+   
Sbjct: 61  VVALQIAETIVEEEIVRDADISAPTRVRRFLSRFFVVIIVALAIEGLVATFKAMHEDTAQ 120

Query: 121 LIYAAALLAGTGVLLAAWGYFIYCNRAAEELEPDAMQEAKEEDKKI 166
           L YAA++L  T +LLAAWG F++ NR+AEELEP+AM++AK ED K+
Sbjct: 121 LPYAASILMATALLLAAWGVFVHLNRSAEELEPEAMEDAKNEDHKL 166


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.326    0.138    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 156,703
Number of extensions: 3117
Number of successful extensions: 22
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 1,000,347
Length adjustment: 75
Effective length of query: 93
Effective length of database: 753,222
Effective search space: 70049646
Effective search space used: 70049646
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 125 (52.8 bits)