BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3404.p
         (848 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096438|ref|YP_001101513.1| glucosyltransferase MdoH [Hermi...   949   0.0  

>gi|134096438|ref|YP_001101513.1| glucosyltransferase MdoH
           [Herminiimonas arsenicoxydans]
          Length = 837

 Score =  949 bits (2452), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/833 (61%), Positives = 607/833 (72%), Gaps = 44/833 (5%)

Query: 13  ARAGAIGSGDPVADLHRVLAEASGRDASTLPVAAQASVDARLRLMYPEVTAAEPVAGAAV 72
           A   A+ + D +  LH +LA+ +  DA      A  SV AR++L   +       A    
Sbjct: 32  AEKPALSTHDAMTRLHHILAQ-NNADAGN---PAYGSVAARVQLALGQ-------AALCC 80

Query: 73  PPIAEERGQ--PRIPVGPPMHRKSMVPRPWGELNPFARWVEEENRRLERRPSRWRRARKG 130
                +RG+   ++ V PP+HR SMVP PWG LNP  RW +    R +   +    A   
Sbjct: 81  GHDDADRGKDPAQLCVAPPVHRASMVPHPWGTLNPVKRWFQTLFGRAQAADATAAAAPPA 140

Query: 131 RAKAVEPEVVDDEPRYIEDHLDQSEAPDPKGHWQHTGNVRRITLLILMVLQTSMATYFMS 190
               V                              +G +RR+ LL+LM+ QT++ATY+MS
Sbjct: 141 EDNTV------------------------------SGGMRRLVLLLLMLGQTALATYYMS 170

Query: 191 DVLPYHGTKPLEMVVLFLFGLLFLWVSAGFWTAMTGFLVLMRGDDKYLISHEKAGNTEIA 250
            VLPY G + LE+ +L LF LLF WVSAGFWTAMTGF++L RG D YLIS     +  IA
Sbjct: 171 RVLPYQGKEWLEIAMLALFALLFCWVSAGFWTAMTGFILLARGKDPYLISKTAVADGAIA 230

Query: 251 PEARTAIVMPICNEDVARVFAGLRATYESLERTGQIAHFDFFILSDSGEADICAAETAAW 310
            +ARTAIVMPICNEDVARVFAGLRATYES+++TGQ+A FDFFILSDSG +DICAAE AAW
Sbjct: 231 ADARTAIVMPICNEDVARVFAGLRATYESVQKTGQLARFDFFILSDSGNSDICAAEVAAW 290

Query: 311 NRLCRETGGFGRIFYRHRRRRVKRKSGNLDDFCRRWGADYRYMVVLDADSVMTGDCLTKL 370
             LC+   GFGRI+YR R+RRV+RKSGN+DDFCRRWG +YRYMVVLDADSVM+G CL+KL
Sbjct: 291 AALCKAVDGFGRIYYRRRQRRVRRKSGNIDDFCRRWGNNYRYMVVLDADSVMSGACLSKL 350

Query: 371 TRLMEAHPGAGIIQTAPRAAGRDTLYARIQQFSTRVYGPLFTAGLHYWQLGESHFWGHNA 430
            + MEA+P AGIIQTAPRAAGRDTLYARIQQFSTRVYGPLFTAGLHYWQLGESH+WGHNA
Sbjct: 351 VQSMEANPDAGIIQTAPRAAGRDTLYARIQQFSTRVYGPLFTAGLHYWQLGESHYWGHNA 410

Query: 431 IIRLQPFMKYCALAPLPGKGNLSGPIMSHDFVEASLMRRAGWSVWIAYDLDGSYEEMPPN 490
           IIRL+PF+++CALA LPGKG  +G I+SHDF+EA+LMRRAGW VWIAYDLDGSYEEMPPN
Sbjct: 411 IIRLKPFIEHCALALLPGKGPFAGEILSHDFIEAALMRRAGWKVWIAYDLDGSYEEMPPN 470

Query: 491 LLDELSRDRRWCQGNLMNFRLFLARGMHIVHRAVFVTGVMAYVSAPLWGLFLILSTVLLA 550
           LLDEL RDRRWCQGNLMNFRLFL+RGMH VHRAVFVTGVMAY+SAPLW LFLILST LLA
Sbjct: 471 LLDELKRDRRWCQGNLMNFRLFLSRGMHSVHRAVFVTGVMAYLSAPLWFLFLILSTGLLA 530

Query: 551 AHTLIDPQYFTAPRQLFPIWPEWHPEKALALVSATATILFLPKILAVLLFAVKGARGFGG 610
            HTL DP YFT P QLFP WP+WHPEKALAL SATAT+LFLPKIL+ +L  ++GA+ FGG
Sbjct: 531 QHTLTDPTYFTEPWQLFPNWPQWHPEKALALFSATATLLFLPKILSAVLICIQGAKQFGG 590

Query: 611 ALALLVSMLIELLFSMALAPVRMLFHTRFVLGAFLGWNAGWKSPPRADNETGWGEAMRRH 670
            + LL S+LIE+ FSM LAPVRMLFHT FV+ AF+GW   WKSPPR D ET  GEA R H
Sbjct: 591 RMRLLFSVLIEMFFSMLLAPVRMLFHTHFVIAAFMGWALRWKSPPREDAETSPGEAFRHH 650

Query: 671 GWHSLLGLAWGALVYWLNPSFIWWLIPIAGSLAVSVPVSVLSSRVSYGRGFRRAGLFKIP 730
           G H+LLGLAWGA V+WLNP+F+ WL+PI GSLAV++P+S+ SS+VS G  FR+  LF IP
Sbjct: 651 GLHTLLGLAWGAAVFWLNPTFLPWLLPIVGSLAVAIPISIYSSKVSNGLRFRKQNLFLIP 710

Query: 731 EETSPPFELRETVRHHEQTPPLPGFVEAVVDPSFNALVCATAHAHPQVPQLTRHLREKLV 790
           EE  PP EL  TV H + TPP P F+ AVV+P FN ++CA++  H +     + +   +V
Sbjct: 711 EEAEPPVELLATVAHVKATPPAPDFIAAVVEPRFNGVMCASSKLHQRRSPAAQKISADMV 770

Query: 791 RTALKDGPDALNDKQKNSILEEPGLLSQLHQAVWSGVPEVHADWRAALERQVP 843
           RTAL  GP AL D QKNS+L +P  LSQLH AVW+   + HADW A L  + P
Sbjct: 771 RTALLGGPSALADAQKNSLLSDPLHLSQLHLAVWTS-DQAHADWAARLRPKSP 822


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.324    0.138    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 1,567,141
Number of extensions: 61811
Number of successful extensions: 218
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 216
Number of HSP's successfully gapped: 1
Length of query: 848
Length of database: 1,000,347
Length adjustment: 90
Effective length of query: 758
Effective length of database: 703,797
Effective search space: 533478126
Effective search space used: 533478126
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 133 (55.8 bits)