BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3341.p
         (283 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094528|ref|YP_001099603.1| glutamate methyltransferase [He...    72   4e-14

>gi|134094528|ref|YP_001099603.1| glutamate methyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 300

 Score = 71.6 bits (174), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 11/192 (5%)

Query: 71  FPALMDYLTVQVSEMFRDPSYFLALREKVVPLLRTYPSLKIWVAGCSSGEEVYSLAILLR 130
           + A  + LT  ++  FR+  +F  L E    L +    ++IW +  S+GEE YS+A+   
Sbjct: 85  WEAFTNALTTNLTSFFRESHHFPILAEH---LKKVKEPIEIWCSAASTGEEPYSIAMTAC 141

Query: 131 E--EGLLERSIIYATDINQAALKKAEAGVYELDRIAGFTSNHQKAGARTSLSDYYTAAYG 188
           E    L     I ATDI+   L     GVY +DR+   +       AR        A  G
Sbjct: 142 EAFNTLTPPVRIIATDIDTNVLNTGANGVYSIDRLDKMSPER----ARRFFLRGKGAREG 197

Query: 189 AVMFDKSLRKNVVFSDHSLATDS--VFAEMHLVSCRNVLIYFNRHLQERALGLFRESLVR 246
            V     LR+ + F   +L  D+  V     ++ CRNV+IYF++  Q + L  F   +  
Sbjct: 198 QVRVRPELRQMISFKQVNLLADNWGVSGPFDVIFCRNVMIYFDKPTQGKILDRFAPLMKP 257

Query: 247 KGFLGLGSKESL 258
            G L  G  E+ 
Sbjct: 258 DGLLFAGHSENF 269


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.324    0.137    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 482,639
Number of extensions: 17476
Number of successful extensions: 56
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 54
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 202
Effective length of database: 733,452
Effective search space: 148157304
Effective search space used: 148157304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 128 (53.9 bits)