BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3319.p
         (212 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095679|ref|YP_001100754.1| putative carbonic anhydrase [He...    82   2e-17
gi|134095812|ref|YP_001100887.1| beta-carbonic anhydrase [Hermin...    77   7e-16
gi|134094307|ref|YP_001099382.1| putative carbonate dehydratase ...    62   2e-11

>gi|134095679|ref|YP_001100754.1| putative carbonic anhydrase
           [Herminiimonas arsenicoxydans]
          Length = 209

 Score = 81.6 bits (200), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 94/194 (48%), Gaps = 19/194 (9%)

Query: 7   GFLRFQQDVF-----PSRKELFKSLANGQTPTALFISCSDSRMVPELVTQREPGDLFVIR 61
           G  RF  D+      PSR    + +ANGQ P A+ + CSDSR+  E+V  +  GDLFVIR
Sbjct: 14  GNYRFVTDIHNNDHSPSRARR-QEVANGQEPFAIILGCSDSRVPAEMVFDQGLGDLFVIR 72

Query: 62  NAGNIVPSFGPEPGGVSASVEYAVAQLKVSDIVICGHSDCGAMTAVATCACLDHMPAVRN 121
            AGNIV      P  V  SVE+A  + K   +V+ GHS CGA+ A        +    RN
Sbjct: 73  VAGNIVA-----PSQV-GSVEFAAERYKTKLVVVLGHSQCGAILATLEELKRPNENQSRN 126

Query: 122 WLHHTDAAR-----MINESRHHETEKDRIDGMVRENVIAQLNNIRTHPSVAVALAQGR-L 175
                D  R     ++     H+ E   +   VR N+ A +N++R    +   L Q   L
Sbjct: 127 LKSIVDRIRPSVATLLETELKHDHEA-LVHQSVRANIRASVNHLRHGSELLENLIQNEGL 185

Query: 176 ALHGWVYDIESGSI 189
            + G  Y +E+G++
Sbjct: 186 LIVGAEYSLETGAV 199


>gi|134095812|ref|YP_001100887.1| beta-carbonic anhydrase
           [Herminiimonas arsenicoxydans]
          Length = 229

 Score = 77.0 bits (188), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 15/173 (8%)

Query: 21  ELFKSLANGQTPTALFISCSDSRMVPELVTQREPGDLFVIRNAGNIVPSFGPEPGGVSAS 80
           + F  LA  Q+P  L+I CSDSR+    +    PG+LFV RN  N+V         V   
Sbjct: 31  DFFAKLAAQQSPEYLWIGCSDSRVPANEIVDLAPGELFVHRNIANVVAHTDLNCLSV--- 87

Query: 81  VEYAVAQLKVSDIVICGHSDCGAMTAVATCACLDHMPAVRNWLHHTD-----AARMINES 135
           +++AV  L V  +++CGH  C  + A         +    NWL H         R + ++
Sbjct: 88  LQFAVDVLGVKHVIVCGHYGCSGVHAAML---RRRVGLADNWLRHVQDVHQKYGRYLGDA 144

Query: 136 RHHETEKDRIDGMVRENVIAQLNNIRTHPSVAVALAQGR-LALHGWVYDIESG 187
              + + DR   +   NVI Q+ N+     V  A  +G+ L +HGWVY ++ G
Sbjct: 145 LPTQAQHDR---LCELNVIEQVANVCRTTIVQDAWERGQELTIHGWVYGLKDG 194


>gi|134094307|ref|YP_001099382.1| putative carbonate dehydratase
           [Herminiimonas arsenicoxydans]
          Length = 253

 Score = 62.4 bits (150), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 24/172 (13%)

Query: 28  NGQTPTALFISCSDSRMVPELVTQREPGDLFVIRNAGNIVPSFGPEPGGVSASVEYAVAQ 87
           +GQ P A  +SC DSR  P  V  +  GDLFV   AGN+V         +  S+EYA   
Sbjct: 93  DGQFPLASIVSCIDSRSAPSQVFDQGVGDLFVASVAGNVVND------DILGSLEYASKV 146

Query: 88  LKVSDIVICGHSDCGAMTAVATCACLDHMPAVRNWL----------HHTDAARMINESRH 137
           +    IV+ GH+ CG +      A L ++  + N +          H +D       S++
Sbjct: 147 VGTKLIVVLGHTHCGGVKGACDAAELGNLTQLLNKIRPAVNMTPDVHGSD-----RSSKN 201

Query: 138 HETEKDRIDGMVRENVIAQLNNIRTHPSVAVALAQGRLALHGWVYDIESGSI 189
           H    +  +  V+ NV A L+     P +     +G++ + G + D+E+G I
Sbjct: 202 HYFVDEVAENNVKLNVKAVLDK---SPVLREMAQKGQVKVIGAMLDVETGKI 250


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.321    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 409,021
Number of extensions: 15181
Number of successful extensions: 39
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 3
Length of query: 212
Length of database: 1,000,347
Length adjustment: 78
Effective length of query: 134
Effective length of database: 743,337
Effective search space: 99607158
Effective search space used: 99607158
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 127 (53.5 bits)