BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3265.p
         (461 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094435|ref|YP_001099510.1| putative ribonuclease BN transm...   499   e-142

>gi|134094435|ref|YP_001099510.1| putative ribonuclease BN
           transmembrane protein [Herminiimonas arsenicoxydans]
          Length = 434

 Score =  499 bits (1285), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 240/414 (57%), Positives = 308/414 (74%), Gaps = 6/414 (1%)

Query: 11  MRGLTRQQLSDLLRFAGRRLREDRLPQVAGSLTFTTILSLVPMLTIALALFTAFPLFSTF 70
            R L+  QL +L+RFA RRL E+RLPQVAGSLTFT++L+LVP+LTIALA+FT FPLF+TF
Sbjct: 22  FRELSWAQLRNLIRFAARRLDEERLPQVAGSLTFTSVLALVPVLTIALAIFTTFPLFNTF 81

Query: 71  RASLEAYFVDNLMPKGVANTILGYLNQFAAKSARISAVGGVLLILTSVLTMSTIESVFNQ 130
           RASLEAYFV NLMP+G+ANTILGYL QF+ K+ R+SAVG V LI+T+V+ M  I+ VFNQ
Sbjct: 82  RASLEAYFVQNLMPQGIANTILGYLTQFSTKATRLSAVGAVALIVTAVMMMLMIDRVFNQ 141

Query: 131 IWRVKKSRPLVQRVLVYWAIITLGPLLIGVSISVTSYLSTATGGAVKSLPWLGASFYTLV 190
           IWRVK  RP++QR+L+YWAI+TLGPLLIG S+++TSYL TAT GAV+ +P+ G   Y+ +
Sbjct: 142 IWRVKTKRPIMQRILIYWAIVTLGPLLIGASMTLTSYLFTATNGAVRDIPFFGGVLYSSI 201

Query: 191 SLMFSTLAYTLLYSTVPNQTVDWRDAAAGGLLAGIGLEIAKRLFAAYILKFPTYTMVYGT 250
           S++ +T+A+T LY  VPN+ V+WRDA  GGLLA I  E+ KRLFA +++K PTYT+VYG 
Sbjct: 202 SILLTTVAFTSLYIVVPNRFVEWRDALCGGLLAAIAFEVVKRLFAIFVVKVPTYTVVYGA 261

Query: 251 VAVLPIFLVWIYMMWMVTLFGALLTAALPVVRYERWWHVPSPGAEFIDAVKVLKCLHAAR 310
           VA  PIFLVWIY+ W++TL GA++TAALP+V+YERWWHVP PG+ F+DA+ +L  L+ AR
Sbjct: 262 VAAFPIFLVWIYLGWLITLGGAVVTAALPIVKYERWWHVPQPGSAFVDAMALLAVLYEAR 321

Query: 311 VGVDSAVVSMEEVRRATKLGLGELQQLLARMSEEGWVASVKPDTRARSGWNRRITDDMDR 370
              D AVV     R  T+LG  E + LL +M + GWV  ++ +   R  W +RITD +DR
Sbjct: 322 TAADCAVVDSRLFREKTRLGFDESETLLEKMLDAGWVGRIRNEQPKRMQWGKRITDGLDR 381

Query: 371 WTLAANPGTIQLARVYRLFVFDPAVLAQAGEEETLVTRVEEAINAVLAQSLEEY 424
           WTL  NP  + LA VYRLFVFD      A   E L  +VE A+   L  SL EY
Sbjct: 382 WTLLVNPQYLTLADVYRLFVFD------AAGNEALAKKVEVAVEQGLTLSLSEY 429


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.324    0.135    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 749,749
Number of extensions: 27640
Number of successful extensions: 150
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 145
Number of HSP's successfully gapped: 3
Length of query: 461
Length of database: 1,000,347
Length adjustment: 85
Effective length of query: 376
Effective length of database: 720,272
Effective search space: 270822272
Effective search space used: 270822272
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 130 (54.7 bits)