BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3262.p
         (629 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094438|ref|YP_001099513.1| hypothetical protein HEAR1209 [...   565   e-162
gi|134093650|ref|YP_001098725.1| putative 1-acyl-sn-glycerol-3-p...    60   4e-10

>gi|134094438|ref|YP_001099513.1| hypothetical protein HEAR1209
           [Herminiimonas arsenicoxydans]
          Length = 392

 Score =  565 bits (1457), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 283/387 (73%), Positives = 324/387 (83%), Gaps = 1/387 (0%)

Query: 50  MDPGLLNNLIPGLFILPFFLFSATSGQLADKLEKGRMARAVKLLEIVIMAIAAYGWMTHH 109
           MD G LNNLIPGLFILPF LFSA +GQLADK EK  + R +KLLEI IM +AA GW  H 
Sbjct: 1   MDRGFLNNLIPGLFILPFVLFSAIAGQLADKFEKSGLVRYIKLLEIAIMLLAAVGWFRHD 60

Query: 110 LVLLIAAVIGMGIHSTLFGPVKYAYLPQQLRQDELVGGNGLIEMGTFVGILLGEILGAVL 169
           L LLIAAV GMG+HS LFGPVKYAYLPQ+L  DEL+GGNGL+EMGTFVGILLGE+LGAVL
Sbjct: 61  LWLLIAAVAGMGLHSALFGPVKYAYLPQKLTPDELMGGNGLVEMGTFVGILLGEVLGAVL 120

Query: 170 VVHKPWGLHLVAGVTIGIAVLGWLASLRIPLSPAPVPELKVNWNPFTETVRNIGFSRRNR 229
           V+HKPWG+ LVAG TI IAV GWLAS  IP+SPAP PELK+NWN FTE+VRNI FSR NR
Sbjct: 121 VLHKPWGIELVAGGTIAIAVAGWLASRAIPVSPAPAPELKINWNLFTESVRNIRFSRHNR 180

Query: 230 PVFLSLLGNSWFWFYGAIMLAQFPVYAKNYLHGDHGVFVLLLAVFSVGIGAGSLLCERLS 289
           PVF+++L NSWFWFYGAI+LAQFP+YAK  LHGDH +FVLLL +FS+GIGAGSLLCERLS
Sbjct: 181 PVFMAMLANSWFWFYGAIVLAQFPMYAKQTLHGDHSIFVLLLTIFSLGIGAGSLLCERLS 240

Query: 290 GHKVEIGLVPFGSIGLSVFGLELYFASQAYVTPAAMLDVAGFLAQGGSWRILGDCLGIGL 349
            H VEIGLVP G+IGLS+FG++L+ +S AY     ++D +GFL Q GS RIL DCL IG 
Sbjct: 241 RHTVEIGLVPLGAIGLSIFGIDLFLSSTAYAN-TNLVDASGFLQQAGSIRILLDCLLIGA 299

Query: 350 FGGLYIVPLFALIQTRCDPAHVSRTIAGMNIMNALFMVVSALVAMVLLKAGLTIPQIFLA 409
           FGG+YIVPLFALIQTRCDP H+SRTIAGMNI+NALFMV +AL+AMVLL AGL+IPQ+FL 
Sbjct: 300 FGGVYIVPLFALIQTRCDPKHMSRTIAGMNILNALFMVGAALLAMVLLNAGLSIPQLFLF 359

Query: 410 TAIMNGVVAVYIFSLVPEFLIRFLAWI 436
           TAI+N +V   IF  VPEFL RFLAW+
Sbjct: 360 TAILNALVTAAIFVAVPEFLHRFLAWM 386


>gi|134093650|ref|YP_001098725.1| putative
           1-acyl-sn-glycerol-3-phosphate acyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 250

 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 24/236 (10%)

Query: 389 SALVAMVLLKAGLTIPQIFLATAIMNGVVAVYIFSLVPEFLIRFLAWILIHTFYRVRIVN 448
           S L A+V+L A L    I    A +      YI S    F+I +LA +L    Y+++   
Sbjct: 10  SLLFALVMLVATLIWAPICFLAAPLPYNKRYYITSRWNVFII-WLAKVLCGIRYQIK--G 66

Query: 449 GQAIPDQGPAVLVCNHVSYVDAIAIMAASPRPVRFVMDYQIFKIPLMSWLFRNVRAIPIA 508
            + +PDQ P +L+  H S  + I ++    RP+ FV   ++  +P   W    +R IPI 
Sbjct: 67  YENLPDQ-PVILLSKHQSAWETIFLLCKMTRPLVFVFKKELLYVPFFGWALGLLRMIPI- 124

Query: 509 PVKADPWLTEKAFVDI----AQALHEGELVCIFPEGKLTRDGELNPFKGGVQKIIDRTPV 564
               D    + AF  +     + L +G+ + +FPEG     G+   +KGG  ++   T  
Sbjct: 125 ----DRSSGKDAFAQVITQGRKRLADGQWIIMFPEGTRIPVGQTGRYKGGGARLAVETNT 180

Query: 565 PVLPLALRGLWGSLFSRDPSNPVTRTFKRGLFSRLELVAGEPIAADQVSP-ELLQE 619
            V+P+AL    G  +   P N   +  K GL +   +  G+PI+ + ++  EL+Q+
Sbjct: 181 VVVPIALNP--GECW---PKNSFIK--KPGLVT---VSIGKPISPEGLTAVELMQQ 226


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.328    0.144    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 1,229,426
Number of extensions: 54459
Number of successful extensions: 216
Number of sequences better than 1.0e-08: 4
Number of HSP's gapped: 214
Number of HSP's successfully gapped: 4
Length of query: 629
Length of database: 1,000,347
Length adjustment: 87
Effective length of query: 542
Effective length of database: 713,682
Effective search space: 386815644
Effective search space used: 386815644
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 132 (55.5 bits)