BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3252.p
         (222 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134094450|ref|YP_001099525.1| N-(5'-phosphoribosyl)anthranila...   298   1e-82

>gi|134094450|ref|YP_001099525.1| N-(5'-phosphoribosyl)anthranilate
           isomerase [Herminiimonas arsenicoxydans]
          Length = 227

 Score =  298 bits (764), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 146/219 (66%), Positives = 169/219 (77%)

Query: 1   MSFRTRIKICGLTREEDVRATVAAGADALGLVFYPKSPRYVTPQRAGELARAVPPFVSMV 60
           M  RTRIKICGLTR ED++  +AAGADA+G VFY +SPRY+ P  A +L   +PPFVS V
Sbjct: 4   MIHRTRIKICGLTRAEDMQDALAAGADAIGFVFYARSPRYIAPDAAAQLIAQLPPFVSAV 63

Query: 61  GLFVNPTLEEVQQVLAQAPLTVLQFHGDETPEQCAAIARAVVRPFIRAARIGSSTQPADL 120
           GLFVN  +EEVQ V+AQ  + +LQFHGDET  +CAAIA AV RPFIRA R+   T  ADL
Sbjct: 64  GLFVNAGVEEVQAVVAQTSIALLQFHGDETVTECAAIAAAVNRPFIRAIRVKPDTSAADL 123

Query: 121 LEYEQAYRSASPLFTGLLLDTLVEEYGGSGKVFDWSLIPKELAPRAVLSGGLSVHNVTEA 180
           L+YE  YR+AS LF GLLLDT V+ YGGSGKVFDWSLIP  +APR VLSGGLS  N T+A
Sbjct: 124 LKYESDYRAASRLFAGLLLDTYVDSYGGSGKVFDWSLIPANIAPRVVLSGGLSAQNATDA 183

Query: 181 VAGVRPYAVDISSGVEAAKGIKDAARIEAFIQAVRLADA 219
           V  +RPYAVD+SSGVE  KGIKD A+I AFI AVR+ADA
Sbjct: 184 VQRIRPYAVDVSSGVERDKGIKDVAKINAFIAAVRVADA 222


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.134    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 420,009
Number of extensions: 17159
Number of successful extensions: 58
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 58
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 1,000,347
Length adjustment: 78
Effective length of query: 144
Effective length of database: 743,337
Effective search space: 107040528
Effective search space used: 107040528
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 127 (53.5 bits)