BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3240.p
         (280 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095365|ref|YP_001100440.1| phosphoesterase PHP, N-terminal...   407   e-115

>gi|134095365|ref|YP_001100440.1| phosphoesterase PHP, N-terminal
           [Herminiimonas arsenicoxydans]
          Length = 276

 Score =  407 bits (1045), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 193/275 (70%), Positives = 225/275 (81%)

Query: 4   LKFDLHCHSNVSDGLLSPEEVAARAKANGVDVWALTDHDEVGGVARARAAAHALGMKHVA 63
           L  DLH HSN SDG L+P ++AARAKA+GVDVWA+TDHDEV G+A AR AA AL +  V+
Sbjct: 2   LNADLHSHSNFSDGTLTPADLAARAKAHGVDVWAMTDHDEVSGIAEARVAATALDLPFVS 61

Query: 64  GVEISVTWAGHTVHVVGLRIDENNRALVEGLAATRNGRERRAREIAAALEQHGIGGAYEG 123
           GVEIS+TWA  TVH+VGL+IDE N ALV+GLAATR GRE+RAREI+A L   GI  A+EG
Sbjct: 62  GVEISITWAAQTVHIVGLQIDEKNAALVQGLAATRGGREQRAREISAQLAAAGIPDAFEG 121

Query: 124 ALQHVGNPDLISRTHFARYLVECGHCCDTKEVFANYLTEGKPGYVPHRWATLEEAVRWIR 183
           AL+ VGNPDLISRTHFARY++E G   D  +VFA+YL EGKPG+VPHRWATL+ AV WIR
Sbjct: 122 ALKFVGNPDLISRTHFARYIIELGLSKDLHDVFADYLGEGKPGFVPHRWATLQNAVEWIR 181

Query: 184 GAGGVAVIAHPGRYKYTQTQFGALFDEFRQLGGAAIEVNTGSHTPEQYQQYAQVARSYGF 243
           GAGG+AVIAHPGRYK++   F ALF EF+ LGGA IEV TGSHT +QY  YA+VA++Y F
Sbjct: 182 GAGGIAVIAHPGRYKFSDLAFDALFQEFKDLGGAGIEVTTGSHTADQYDYYAKVAKNYSF 241

Query: 244 LGSMGSDFHGPGESRLDLGELPPLPVGVKPVWHDW 278
           L S GSDFHGPGESR+DLG+LPPLP GV PVWHDW
Sbjct: 242 LASRGSDFHGPGESRIDLGKLPPLPHGVTPVWHDW 276


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.136    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 561,266
Number of extensions: 21487
Number of successful extensions: 63
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 63
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 1,000,347
Length adjustment: 81
Effective length of query: 199
Effective length of database: 733,452
Effective search space: 145956948
Effective search space used: 145956948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)