BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3149.p
         (322 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134096506|ref|YP_001101581.1| putative proline iminopeptidase...   338   2e-94

>gi|134096506|ref|YP_001101581.1| putative proline iminopeptidase
           (PIP) (prolyl aminopeptidase) (PAP) [Herminiimonas
           arsenicoxydans]
          Length = 323

 Score =  338 bits (868), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 167/319 (52%), Positives = 214/319 (67%), Gaps = 3/319 (0%)

Query: 1   MSSTSNAPLRSLYPPIEPYDHGLLDVGDGHQVYWEVCGNPNGKPVVFLHGGPGGGCGPSH 60
           M ++S+    +L+PP++PY  G+L V   H +YWE CGNP G PV+FLHGGPGGG  PSH
Sbjct: 1   MKTSSSK--TALFPPLQPYRSGMLPVDQLHALYWEECGNPEGVPVLFLHGGPGGGITPSH 58

Query: 61  RRLFNPEKYRIVLFDQRGCGRSLPHANLEANTTWDLVADIERLRELLGIDRWQVFGGSWG 120
           R+ F+P  YRIVLFDQRG G+S P   +  NTT  L+ADIE +R +LGI++W VFGGSWG
Sbjct: 59  RQFFDPAYYRIVLFDQRGAGKSTPPGEVRNNTTPLLIADIEAIRRMLGIEQWLVFGGSWG 118

Query: 121 STLALAYAQTHPQRVTELVLRGIFLLRQAELDWYYQEGASWMAPDRWDEFLAPIPVAERG 180
           +TLALAY Q HPQ     VLRGIFL  QAE+DW +  G     P   D F+A IP +ERG
Sbjct: 119 ATLALAYGQAHPQCCLGFVLRGIFLCTQAEIDW-FMYGMRTFFPQEHDAFIADIPPSERG 177

Query: 181 NLVHAYRKRLTGDDQAAKLQAARAWSRWEASTITLVADERLIDSFNDAQFALAFARIENH 240
           +L+ AY+ RL GDD     +AAR WSR+E S + L      I++ +D   A+   R+E H
Sbjct: 178 DLLRAYQARLFGDDGEVAARAARNWSRYEGSCLFLQPQPETIEACSDDAIAIGIGRLEAH 237

Query: 241 YFFNKGFMEEGQLLTNASRLEGIPGVIVQGRYDLATPAKSAWDLHQAWPGSQLHLIDSAG 300
           YF + GF+EE QL+ +  R+  +P VIVQGRYD   P  SAW LHQAWP ++LH+I  AG
Sbjct: 238 YFLHGGFIEEDQLIRDLDRIRHLPAVIVQGRYDAVCPPVSAWRLHQAWPQARLHIIADAG 297

Query: 301 HAYNEPGILDQLIAATDRF 319
           HA  EPG    L+AAT++F
Sbjct: 298 HAALEPGTAAALVAATEQF 316


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.321    0.138    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 675,699
Number of extensions: 28156
Number of successful extensions: 66
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 65
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 1,000,347
Length adjustment: 82
Effective length of query: 240
Effective length of database: 730,157
Effective search space: 175237680
Effective search space used: 175237680
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)