BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3121.p
         (405 letters)

Database: BlastDatabases/690/690 
           3295 sequences; 1,000,347 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134095425|ref|YP_001100500.1| aromatic amino acid aminotransf...   689   0.0  

>gi|134095425|ref|YP_001100500.1| aromatic amino acid
           aminotransferase [Herminiimonas arsenicoxydans]
          Length = 404

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/405 (80%), Positives = 363/405 (89%), Gaps = 1/405 (0%)

Query: 1   MNAPVSASLFSAIEMAPRDPILGVTEAYNADQNPAKTNLGVGVYYDDNGKVPLLECVKKA 60
           MNAP+ ASL +AIEMAPRDPILG+TEA+NAD+NP K NLGVGVY DDNGK+PLLECV+KA
Sbjct: 1   MNAPIPASLLNAIEMAPRDPILGITEAFNADKNPNKINLGVGVYNDDNGKLPLLECVRKA 60

Query: 61  EAELAAKLAPRTYLPIDGLATYDRAVQELVFGTGSAVVTEKRAITVQALGGTGALKLGAD 120
           EA+L  KL+PR YLPIDGLA YD+AVQELVFG  S+VV +KRA+T QA+GGTGALKLGAD
Sbjct: 61  EAQLMEKLSPRGYLPIDGLAAYDKAVQELVFGADSSVVKDKRAVTAQAIGGTGALKLGAD 120

Query: 121 FLKHFSPTGTEVWISDPSWENHRALFEMAGFKVNAYPYYDPATRGVNFAGMLDALKTMKT 180
           FLK F+P   +VWISDPSWENHRALFE AGF VN YPYYD ATRGVNFAGMLD LK++ +
Sbjct: 121 FLKRFAPNA-QVWISDPSWENHRALFESAGFVVNNYPYYDAATRGVNFAGMLDTLKSIPS 179

Query: 181 GSVVLLHACCHNPTGADLTADQWTQVIEVVTSRGLIPFLDMAYQGFGDGIAEDGQVVRRF 240
           GS+VLLHACCHNPTGADL   QW +V+ VVT+RGLIPFLDMAYQGFGDGI  DG+VVR+F
Sbjct: 180 GSIVLLHACCHNPTGADLNDAQWLEVLNVVTTRGLIPFLDMAYQGFGDGIEADGKVVRQF 239

Query: 241 AEAGGPLFVSNSFSKSFSLYGERVGALSIAAASAEEAARVLSQLKRVVRTNYSNPPIHGG 300
           AEAGGP+FVSNSFSKSFSLYGERVGALSI +++AEEA+RVLSQLKRV+RTNYSNPP+HGG
Sbjct: 240 AEAGGPVFVSNSFSKSFSLYGERVGALSIVSSNAEEASRVLSQLKRVIRTNYSNPPMHGG 299

Query: 301 QVVATALASPELRKLWEDELAEMRVRIREMRHLLVAKLKEKAPGHDFDFVIKQRGMFSYS 360
           QVVATALASPELR LWE+ELA MRVRIREMR   V KLKE+AP H+FDFV KQRGMFSYS
Sbjct: 300 QVVATALASPELRALWEEELAGMRVRIREMRQAFVQKLKEQAPAHNFDFVTKQRGMFSYS 359

Query: 361 GLTKAQVDRLRNEFSIYAVDTGRICVAALNTKNIDVVVDAIAKVL 405
           GLTK QVDRLR+EFSIYAVDTGRICVAALNTKNID V+ AIAKVL
Sbjct: 360 GLTKPQVDRLRDEFSIYAVDTGRICVAALNTKNIDYVIAAIAKVL 404


  Database: BlastDatabases/690/690
    Posted date:  Apr 9, 2011  4:48 AM
  Number of letters in database: 1,000,347
  Number of sequences in database:  3295
  
Lambda     K      H
   0.319    0.134    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3295
Number of Hits to DB: 720,310
Number of extensions: 27313
Number of successful extensions: 88
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 88
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 1,000,347
Length adjustment: 84
Effective length of query: 321
Effective length of database: 723,567
Effective search space: 232265007
Effective search space used: 232265007
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)